Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
LHX1P48742 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LHX1P48742 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.74■□□□□ 0.91
LHX1P48742 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
LHX1P48742 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
LHX1P48742 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.74■□□□□ 0.91
LHX1P48742 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.74■□□□□ 0.91
LHX1P48742 AC116562.2-201ENST00000507042 360 ntBASIC20.74■□□□□ 0.91
LHX1P48742 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LHX1P48742 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.74■□□□□ 0.91
LHX1P48742 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.74■□□□□ 0.91
LHX1P48742 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.74■□□□□ 0.91
LHX1P48742 AL355075.4-201ENST00000554988 638 ntBASIC20.74■□□□□ 0.91
LHX1P48742 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LHX1P48742 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.74■□□□□ 0.91
LHX1P48742 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.74■□□□□ 0.91
LHX1P48742 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LHX1P48742 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LHX1P48742 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LHX1P48742 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LHX1P48742 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LHX1P48742 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LHX1P48742 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LHX1P48742 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
LHX1P48742 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.73■□□□□ 0.91
LHX1P48742 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.73■□□□□ 0.91
LHX1P48742 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
LHX1P48742 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
LHX1P48742 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LHX1P48742 AC004980.1-204ENST00000429707 299 ntBASIC20.73■□□□□ 0.91
LHX1P48742 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.73■□□□□ 0.91
LHX1P48742 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.73■□□□□ 0.91
LHX1P48742 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LHX1P48742 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.73■□□□□ 0.91
LHX1P48742 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LHX1P48742 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.73■□□□□ 0.91
LHX1P48742 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LHX1P48742 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LHX1P48742 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LHX1P48742 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
LHX1P48742 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.73■□□□□ 0.91
LHX1P48742 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
LHX1P48742 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LHX1P48742 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
LHX1P48742 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LHX1P48742 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LHX1P48742 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
LHX1P48742 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LHX1P48742 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
LHX1P48742 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LHX1P48742 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.72■□□□□ 0.91
LHX1P48742 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.72■□□□□ 0.91
LHX1P48742 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.72■□□□□ 0.91
LHX1P48742 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
LHX1P48742 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.72■□□□□ 0.91
LHX1P48742 REXO1L10P-201ENST00000615707 1290 ntBASIC20.72■□□□□ 0.91
LHX1P48742 REXO1L12P-201ENST00000622156 912 ntBASIC20.72■□□□□ 0.91
LHX1P48742 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LHX1P48742 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LHX1P48742 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LHX1P48742 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LHX1P48742 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LHX1P48742 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LHX1P48742 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.71■□□□□ 0.91
LHX1P48742 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LHX1P48742 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LHX1P48742 FSCN1P1-201ENST00000568912 1481 ntBASIC20.71■□□□□ 0.91
LHX1P48742 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.71■□□□□ 0.91
LHX1P48742 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.71■□□□□ 0.91
LHX1P48742 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
LHX1P48742 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.71■□□□□ 0.91
LHX1P48742 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.71■□□□□ 0.91
LHX1P48742 BX088651.1-201ENST00000540551 451 ntBASIC20.71■□□□□ 0.91
LHX1P48742 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.71■□□□□ 0.91
LHX1P48742 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.71■□□□□ 0.91
LHX1P48742 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LHX1P48742 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.71■□□□□ 0.91
LHX1P48742 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LHX1P48742 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.71■□□□□ 0.91
LHX1P48742 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LHX1P48742 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
LHX1P48742 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.7■□□□□ 0.9
LHX1P48742 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LHX1P48742 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
LHX1P48742 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LHX1P48742 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.7■□□□□ 0.9
LHX1P48742 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LHX1P48742 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LHX1P48742 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LHX1P48742 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LHX1P48742 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LHX1P48742 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.7■□□□□ 0.9
LHX1P48742 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.7■□□□□ 0.9
LHX1P48742 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.7■□□□□ 0.9
LHX1P48742 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LHX1P48742 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.7■□□□□ 0.9
LHX1P48742 AC073912.3-201ENST00000624414 853 ntBASIC20.7■□□□□ 0.9
LHX1P48742 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LHX1P48742 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LHX1P48742 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms