Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
GDF1P27539 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GDF1P27539 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.75■□□□□ 0.43
GDF1P27539 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.75■□□□□ 0.43
GDF1P27539 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.75■□□□□ 0.43
GDF1P27539 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GDF1P27539 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.75■□□□□ 0.43
GDF1P27539 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.75■□□□□ 0.43
GDF1P27539 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.75■□□□□ 0.43
GDF1P27539 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.75■□□□□ 0.43
GDF1P27539 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GDF1P27539 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GDF1P27539 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GDF1P27539 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
GDF1P27539 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GDF1P27539 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GDF1P27539 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GDF1P27539 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GDF1P27539 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GDF1P27539 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
GDF1P27539 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GDF1P27539 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.74■□□□□ 0.43
GDF1P27539 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GDF1P27539 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.74■□□□□ 0.43
GDF1P27539 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.74■□□□□ 0.43
GDF1P27539 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GDF1P27539 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GDF1P27539 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GDF1P27539 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
GDF1P27539 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GDF1P27539 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
GDF1P27539 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
GDF1P27539 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
GDF1P27539 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.73■□□□□ 0.43
GDF1P27539 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
GDF1P27539 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.73■□□□□ 0.43
GDF1P27539 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.73■□□□□ 0.43
GDF1P27539 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GDF1P27539 NUDT16P1-203ENST00000513809 620 ntBASIC17.73■□□□□ 0.43
GDF1P27539 AL355075.4-201ENST00000554988 638 ntBASIC17.73■□□□□ 0.43
GDF1P27539 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.73■□□□□ 0.43
GDF1P27539 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
GDF1P27539 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
GDF1P27539 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GDF1P27539 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
GDF1P27539 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GDF1P27539 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GDF1P27539 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GDF1P27539 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.72■□□□□ 0.43
GDF1P27539 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GDF1P27539 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
GDF1P27539 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.72■□□□□ 0.43
GDF1P27539 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
GDF1P27539 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.72■□□□□ 0.43
GDF1P27539 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.72■□□□□ 0.43
GDF1P27539 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GDF1P27539 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.72■□□□□ 0.43
GDF1P27539 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GDF1P27539 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.72■□□□□ 0.43
GDF1P27539 AC009237.14-201ENST00000609975 1594 ntBASIC17.72■□□□□ 0.43
GDF1P27539 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GDF1P27539 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GDF1P27539 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GDF1P27539 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GDF1P27539 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
GDF1P27539 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.72■□□□□ 0.43
GDF1P27539 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.72■□□□□ 0.43
GDF1P27539 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GDF1P27539 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.72■□□□□ 0.43
GDF1P27539 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
GDF1P27539 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.72■□□□□ 0.43
GDF1P27539 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.72■□□□□ 0.43
GDF1P27539 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.72■□□□□ 0.43
GDF1P27539 AC073912.3-201ENST00000624414 853 ntBASIC17.72■□□□□ 0.43
GDF1P27539 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GDF1P27539 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.72■□□□□ 0.43
GDF1P27539 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.72■□□□□ 0.43
GDF1P27539 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.72■□□□□ 0.43
GDF1P27539 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GDF1P27539 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GDF1P27539 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
GDF1P27539 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
GDF1P27539 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
GDF1P27539 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
GDF1P27539 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GDF1P27539 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
GDF1P27539 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GDF1P27539 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GDF1P27539 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.71■□□□□ 0.43
GDF1P27539 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GDF1P27539 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
GDF1P27539 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GDF1P27539 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GDF1P27539 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GDF1P27539 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.71■□□□□ 0.43
GDF1P27539 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GDF1P27539 BX088651.1-201ENST00000540551 451 ntBASIC17.71■□□□□ 0.43
GDF1P27539 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.71■□□□□ 0.43
GDF1P27539 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.71■□□□□ 0.43
GDF1P27539 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms