Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LAMA1P25391 AC004951.3-201ENST00000418645 1148 ntBASIC19.2■□□□□ 0.66
LAMA1P25391 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LAMA1P25391 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.2■□□□□ 0.66
LAMA1P25391 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LAMA1P25391 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LAMA1P25391 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LAMA1P25391 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LAMA1P25391 AC007375.3-201ENST00000600936 2314 ntBASIC19.2■□□□□ 0.66
LAMA1P25391 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LAMA1P25391 AC246785.2-201ENST00000432512 513 ntBASIC19.2■□□□□ 0.66
LAMA1P25391 TSPY21P-201ENST00000433481 731 ntBASIC19.2■□□□□ 0.66
LAMA1P25391 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LAMA1P25391 TSPY23P-201ENST00000440136 739 ntBASIC19.2■□□□□ 0.66
LAMA1P25391 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.2■□□□□ 0.66
LAMA1P25391 AC128688.1-201ENST00000487626 519 ntBASIC19.2■□□□□ 0.66
LAMA1P25391 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.2■□□□□ 0.66
LAMA1P25391 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.2■□□□□ 0.66
LAMA1P25391 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LAMA1P25391 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LAMA1P25391 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LAMA1P25391 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LAMA1P25391 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LAMA1P25391 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.19■□□□□ 0.66
LAMA1P25391 VENTXP5-201ENST00000523979 775 ntBASIC19.19■□□□□ 0.66
LAMA1P25391 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LAMA1P25391 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.19■□□□□ 0.66
LAMA1P25391 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.19■□□□□ 0.66
LAMA1P25391 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LAMA1P25391 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.19■□□□□ 0.66
LAMA1P25391 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.19■□□□□ 0.66
LAMA1P25391 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LAMA1P25391 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LAMA1P25391 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LAMA1P25391 AC112907.3-201ENST00000577781 2400 ntBASIC19.19■□□□□ 0.66
LAMA1P25391 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.19■□□□□ 0.66
LAMA1P25391 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
LAMA1P25391 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LAMA1P25391 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LAMA1P25391 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.19■□□□□ 0.66
LAMA1P25391 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.19■□□□□ 0.66
LAMA1P25391 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.19■□□□□ 0.66
LAMA1P25391 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LAMA1P25391 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LAMA1P25391 HLA-G-202ENST00000376815 851 ntBASIC19.19■□□□□ 0.66
LAMA1P25391 HLA-G-203ENST00000376818 1127 ntBASIC19.19■□□□□ 0.66
LAMA1P25391 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.19■□□□□ 0.66
LAMA1P25391 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LAMA1P25391 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.19■□□□□ 0.66
LAMA1P25391 PCDHAC2-203ENST00000615316 3011 ntBASIC19.19■□□□□ 0.66
LAMA1P25391 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LAMA1P25391 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LAMA1P25391 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LAMA1P25391 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LAMA1P25391 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.19■□□□□ 0.66
LAMA1P25391 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LAMA1P25391 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LAMA1P25391 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.18■□□□□ 0.66
LAMA1P25391 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.18■□□□□ 0.66
LAMA1P25391 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.18■□□□□ 0.66
LAMA1P25391 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
LAMA1P25391 AC010653.2-201ENST00000623505 997 ntBASIC19.18■□□□□ 0.66
LAMA1P25391 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LAMA1P25391 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LAMA1P25391 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LAMA1P25391 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LAMA1P25391 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.18■□□□□ 0.66
LAMA1P25391 AC116351.2-201ENST00000606540 1585 ntBASIC19.18■□□□□ 0.66
LAMA1P25391 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LAMA1P25391 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LAMA1P25391 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LAMA1P25391 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LAMA1P25391 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LAMA1P25391 AL441883.1-201ENST00000566170 1045 ntBASIC19.17■□□□□ 0.66
LAMA1P25391 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LAMA1P25391 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.17■□□□□ 0.66
LAMA1P25391 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
LAMA1P25391 HYMAI.1-201ENST00000620949 238 ntBASIC19.17■□□□□ 0.66
LAMA1P25391 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LAMA1P25391 AL691432.2-201ENST00000607222 2038 ntBASIC19.17■□□□□ 0.66
LAMA1P25391 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LAMA1P25391 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LAMA1P25391 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.17■□□□□ 0.66
LAMA1P25391 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.17■□□□□ 0.66
LAMA1P25391 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.17■□□□□ 0.66
LAMA1P25391 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LAMA1P25391 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.17■□□□□ 0.66
LAMA1P25391 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LAMA1P25391 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.16■□□□□ 0.66
LAMA1P25391 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LAMA1P25391 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.16■□□□□ 0.66
LAMA1P25391 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LAMA1P25391 KRT8P41-201ENST00000533985 1514 ntBASIC19.16■□□□□ 0.66
LAMA1P25391 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LAMA1P25391 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LAMA1P25391 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LAMA1P25391 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.16■□□□□ 0.66
LAMA1P25391 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.16■□□□□ 0.66
LAMA1P25391 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.16■□□□□ 0.66
LAMA1P25391 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms