Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.15■□□□□ 0.34
ATF1P18846 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATF1P18846 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATF1P18846 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATF1P18846 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATF1P18846 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATF1P18846 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATF1P18846 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATF1P18846 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.15■□□□□ 0.34
ATF1P18846 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
ATF1P18846 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.14■□□□□ 0.34
ATF1P18846 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATF1P18846 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATF1P18846 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.14■□□□□ 0.33
ATF1P18846 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATF1P18846 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATF1P18846 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.14■□□□□ 0.33
ATF1P18846 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.14■□□□□ 0.33
ATF1P18846 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
ATF1P18846 AC011767.1-201ENST00000617410 1153 ntBASIC17.14■□□□□ 0.33
ATF1P18846 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATF1P18846 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATF1P18846 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ATF1P18846 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ATF1P18846 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ATF1P18846 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATF1P18846 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATF1P18846 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATF1P18846 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATF1P18846 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATF1P18846 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.14■□□□□ 0.33
ATF1P18846 AC104581.1-202ENST00000635932 2618 ntBASIC17.14■□□□□ 0.33
ATF1P18846 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ATF1P18846 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATF1P18846 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
ATF1P18846 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATF1P18846 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.13■□□□□ 0.33
ATF1P18846 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.13■□□□□ 0.33
ATF1P18846 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATF1P18846 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATF1P18846 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATF1P18846 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.13■□□□□ 0.33
ATF1P18846 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATF1P18846 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATF1P18846 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.13■□□□□ 0.33
ATF1P18846 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATF1P18846 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ATF1P18846 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATF1P18846 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ATF1P18846 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.13■□□□□ 0.33
ATF1P18846 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.13■□□□□ 0.33
ATF1P18846 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.13■□□□□ 0.33
ATF1P18846 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.13■□□□□ 0.33
ATF1P18846 AC069236.1-201ENST00000604339 616 ntBASIC17.13■□□□□ 0.33
ATF1P18846 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATF1P18846 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATF1P18846 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ATF1P18846 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATF1P18846 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATF1P18846 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATF1P18846 KRT8P20-201ENST00000423953 1409 ntBASIC17.13■□□□□ 0.33
ATF1P18846 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATF1P18846 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
ATF1P18846 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ATF1P18846 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ATF1P18846 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ATF1P18846 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATF1P18846 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATF1P18846 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.12■□□□□ 0.33
ATF1P18846 AC006015.1-201ENST00000429970 570 ntBASIC17.12■□□□□ 0.33
ATF1P18846 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.12■□□□□ 0.33
ATF1P18846 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.12■□□□□ 0.33
ATF1P18846 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.12■□□□□ 0.33
ATF1P18846 CYP2T3P-201ENST00000601990 817 ntBASIC17.12■□□□□ 0.33
ATF1P18846 AC008694.1-202ENST00000636953 945 ntBASIC17.12■□□□□ 0.33
ATF1P18846 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.12■□□□□ 0.33
ATF1P18846 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATF1P18846 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATF1P18846 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.12■□□□□ 0.33
ATF1P18846 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATF1P18846 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATF1P18846 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.12■□□□□ 0.33
ATF1P18846 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
ATF1P18846 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ATF1P18846 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATF1P18846 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.12■□□□□ 0.33
ATF1P18846 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATF1P18846 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATF1P18846 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATF1P18846 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATF1P18846 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATF1P18846 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATF1P18846 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATF1P18846 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.11■□□□□ 0.33
ATF1P18846 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ATF1P18846 AP001271.2-201ENST00000624018 1556 ntBASIC17.11■□□□□ 0.33
ATF1P18846 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATF1P18846 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATF1P18846 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATF1P18846 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms