Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPNS1P04632 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CAPNS1P04632 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPNS1P04632 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPNS1P04632 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPNS1P04632 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPNS1P04632 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPNS1P04632 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CAPNS1P04632 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.44■□□□□ 0.7
CAPNS1P04632 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.44■□□□□ 0.7
CAPNS1P04632 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.44■□□□□ 0.7
CAPNS1P04632 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.44■□□□□ 0.7
CAPNS1P04632 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.44■□□□□ 0.7
CAPNS1P04632 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.44■□□□□ 0.7
CAPNS1P04632 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.44■□□□□ 0.7
CAPNS1P04632 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.44■□□□□ 0.7
CAPNS1P04632 AF186192.3-201ENST00000583427 947 ntBASIC19.44■□□□□ 0.7
CAPNS1P04632 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.44■□□□□ 0.7
CAPNS1P04632 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPNS1P04632 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.44■□□□□ 0.7
CAPNS1P04632 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CAPNS1P04632 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CAPNS1P04632 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPNS1P04632 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.44■□□□□ 0.7
CAPNS1P04632 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.44■□□□□ 0.7
CAPNS1P04632 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CAPNS1P04632 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
CAPNS1P04632 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPNS1P04632 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPNS1P04632 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPNS1P04632 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CAPNS1P04632 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CAPNS1P04632 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPNS1P04632 AC079598.2-202ENST00000546624 1451 ntBASIC19.43■□□□□ 0.7
CAPNS1P04632 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPNS1P04632 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPNS1P04632 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CAPNS1P04632 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CAPNS1P04632 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CAPNS1P04632 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CAPNS1P04632 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPNS1P04632 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CAPNS1P04632 AC245052.3-201ENST00000450182 901 ntBASIC19.43■□□□□ 0.7
CAPNS1P04632 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPNS1P04632 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.43■□□□□ 0.7
CAPNS1P04632 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.43■□□□□ 0.7
CAPNS1P04632 AC005829.2-201ENST00000571422 1056 ntBASIC19.43■□□□□ 0.7
CAPNS1P04632 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.43■□□□□ 0.7
CAPNS1P04632 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.43■□□□□ 0.7
CAPNS1P04632 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPNS1P04632 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPNS1P04632 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
CAPNS1P04632 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.43■□□□□ 0.7
CAPNS1P04632 AP000974.1-201ENST00000623909 2387 ntBASIC19.43■□□□□ 0.7
CAPNS1P04632 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CAPNS1P04632 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPNS1P04632 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CAPNS1P04632 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPNS1P04632 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.42■□□□□ 0.7
CAPNS1P04632 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPNS1P04632 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPNS1P04632 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPNS1P04632 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.42■□□□□ 0.7
CAPNS1P04632 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPNS1P04632 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPNS1P04632 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPNS1P04632 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPNS1P04632 RBM17P1-201ENST00000453646 1190 ntBASIC19.42■□□□□ 0.7
CAPNS1P04632 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPNS1P04632 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.42■□□□□ 0.7
CAPNS1P04632 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CAPNS1P04632 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.42■□□□□ 0.7
CAPNS1P04632 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CAPNS1P04632 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.42■□□□□ 0.7
CAPNS1P04632 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.42■□□□□ 0.7
CAPNS1P04632 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CAPNS1P04632 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CAPNS1P04632 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CAPNS1P04632 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.42■□□□□ 0.7
CAPNS1P04632 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPNS1P04632 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPNS1P04632 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CAPNS1P04632 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CAPNS1P04632 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CAPNS1P04632 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.41■□□□□ 0.7
CAPNS1P04632 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.41■□□□□ 0.7
CAPNS1P04632 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.41■□□□□ 0.7
CAPNS1P04632 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CAPNS1P04632 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.41■□□□□ 0.7
CAPNS1P04632 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPNS1P04632 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPNS1P04632 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CAPNS1P04632 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CAPNS1P04632 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPNS1P04632 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CAPNS1P04632 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.41■□□□□ 0.7
CAPNS1P04632 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPNS1P04632 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPNS1P04632 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CAPNS1P04632 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms