Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.46■■□□□ 1.03
VTNP04004 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.46■■□□□ 1.03
VTNP04004 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.46■■□□□ 1.03
VTNP04004 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
VTNP04004 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.46■■□□□ 1.03
VTNP04004 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VTNP04004 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.46■■□□□ 1.03
VTNP04004 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.46■■□□□ 1.03
VTNP04004 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.46■■□□□ 1.03
VTNP04004 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.46■■□□□ 1.03
VTNP04004 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.46■■□□□ 1.03
VTNP04004 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.46■■□□□ 1.03
VTNP04004 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.46■■□□□ 1.03
VTNP04004 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.46■■□□□ 1.03
VTNP04004 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.46■■□□□ 1.03
VTNP04004 AC011298.2-201ENST00000617989 482 ntBASIC21.46■■□□□ 1.03
VTNP04004 AC130371.2-201ENST00000619443 611 ntBASIC21.46■■□□□ 1.03
VTNP04004 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
VTNP04004 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
VTNP04004 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.46■■□□□ 1.03
VTNP04004 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.46■■□□□ 1.03
VTNP04004 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
VTNP04004 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
VTNP04004 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VTNP04004 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
VTNP04004 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.45■■□□□ 1.02
VTNP04004 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
VTNP04004 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.45■■□□□ 1.02
VTNP04004 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.45■■□□□ 1.02
VTNP04004 CRYGFP-201ENST00000418459 633 ntBASIC21.45■■□□□ 1.02
VTNP04004 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.45■■□□□ 1.02
VTNP04004 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.45■■□□□ 1.02
VTNP04004 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
VTNP04004 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VTNP04004 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.45■■□□□ 1.02
VTNP04004 DGCR10-201ENST00000609839 495 ntBASIC21.45■■□□□ 1.02
VTNP04004 AC005363.2-201ENST00000618631 242 ntBASIC21.45■■□□□ 1.02
VTNP04004 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
VTNP04004 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VTNP04004 AC009237.14-201ENST00000609975 1594 ntBASIC21.44■■□□□ 1.02
VTNP04004 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
VTNP04004 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.44■■□□□ 1.02
VTNP04004 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
VTNP04004 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
VTNP04004 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
VTNP04004 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VTNP04004 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
VTNP04004 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
VTNP04004 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VTNP04004 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VTNP04004 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.44■■□□□ 1.02
VTNP04004 TMPOP1-202ENST00000424642 1267 ntBASIC21.44■■□□□ 1.02
VTNP04004 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.44■■□□□ 1.02
VTNP04004 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.44■■□□□ 1.02
VTNP04004 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.44■■□□□ 1.02
VTNP04004 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.44■■□□□ 1.02
VTNP04004 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.44■■□□□ 1.02
VTNP04004 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.44■■□□□ 1.02
VTNP04004 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
VTNP04004 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.44■■□□□ 1.02
VTNP04004 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
VTNP04004 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
VTNP04004 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.44■■□□□ 1.02
VTNP04004 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.44■■□□□ 1.02
VTNP04004 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.44■■□□□ 1.02
VTNP04004 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VTNP04004 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.43■■□□□ 1.02
VTNP04004 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VTNP04004 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VTNP04004 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VTNP04004 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VTNP04004 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
VTNP04004 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VTNP04004 AC005521.1-201ENST00000393351 872 ntBASIC21.43■■□□□ 1.02
VTNP04004 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.43■■□□□ 1.02
VTNP04004 AC004951.3-201ENST00000418645 1148 ntBASIC21.43■■□□□ 1.02
VTNP04004 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.43■■□□□ 1.02
VTNP04004 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.43■■□□□ 1.02
VTNP04004 SLC25A1P4-201ENST00000567977 778 ntBASIC21.43■■□□□ 1.02
VTNP04004 AP005242.2-201ENST00000580065 1175 ntBASIC21.43■■□□□ 1.02
VTNP04004 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.43■■□□□ 1.02
VTNP04004 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VTNP04004 KRT18P22-201ENST00000402024 1347 ntBASIC21.43■■□□□ 1.02
VTNP04004 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.43■■□□□ 1.02
VTNP04004 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VTNP04004 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
VTNP04004 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VTNP04004 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
VTNP04004 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.43■■□□□ 1.02
VTNP04004 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VTNP04004 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.43■■□□□ 1.02
VTNP04004 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
VTNP04004 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.43■■□□□ 1.02
VTNP04004 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VTNP04004 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.42■■□□□ 1.02
VTNP04004 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
VTNP04004 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
VTNP04004 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
VTNP04004 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
VTNP04004 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms