Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHRNA1P02708 AL160286.2-201ENST00000567150 934 ntBASIC21.32■■□□□ 1
CHRNA1P02708 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHRNA1P02708 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHRNA1P02708 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CHRNA1P02708 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHRNA1P02708 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CHRNA1P02708 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.31■■□□□ 1
CHRNA1P02708 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.31■■□□□ 1
CHRNA1P02708 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHRNA1P02708 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHRNA1P02708 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CHRNA1P02708 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CHRNA1P02708 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHRNA1P02708 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.31■■□□□ 1
CHRNA1P02708 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CHRNA1P02708 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
CHRNA1P02708 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.31■■□□□ 1
CHRNA1P02708 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHRNA1P02708 CCR12P-201ENST00000446203 998 ntBASIC21.31■■□□□ 1
CHRNA1P02708 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.31■■□□□ 1
CHRNA1P02708 AL023803.3-201ENST00000615559 522 ntBASIC21.31■■□□□ 1
CHRNA1P02708 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.31■■□□□ 1
CHRNA1P02708 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHRNA1P02708 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
CHRNA1P02708 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CHRNA1P02708 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.31■■□□□ 1
CHRNA1P02708 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CHRNA1P02708 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
CHRNA1P02708 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.3■■□□□ 1
CHRNA1P02708 AC092338.2-201ENST00000568827 1415 ntBASIC21.3■■□□□ 1
CHRNA1P02708 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHRNA1P02708 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CHRNA1P02708 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.3■■□□□ 1
CHRNA1P02708 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHRNA1P02708 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.3■■□□□ 1
CHRNA1P02708 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.3■■□□□ 1
CHRNA1P02708 AC063952.2-201ENST00000498792 1227 ntBASIC21.3■■□□□ 1
CHRNA1P02708 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.3■■□□□ 1
CHRNA1P02708 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.3■■□□□ 1
CHRNA1P02708 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CHRNA1P02708 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHRNA1P02708 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
CHRNA1P02708 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.29■■□□□ 1
CHRNA1P02708 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHRNA1P02708 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CHRNA1P02708 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHRNA1P02708 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CHRNA1P02708 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHRNA1P02708 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHRNA1P02708 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHRNA1P02708 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHRNA1P02708 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHRNA1P02708 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHRNA1P02708 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHRNA1P02708 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.29■■□□□ 1
CHRNA1P02708 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.29■■□□□ 1
CHRNA1P02708 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.29■■□□□ 1
CHRNA1P02708 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.29■■□□□ 1
CHRNA1P02708 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHRNA1P02708 AC139887.4-201ENST00000607877 719 ntBASIC21.29■■□□□ 1
CHRNA1P02708 AL512408.1-201ENST00000569378 2000 ntBASIC21.29■■□□□ 1
CHRNA1P02708 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHRNA1P02708 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.29■■□□□ 1
CHRNA1P02708 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHRNA1P02708 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CHRNA1P02708 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHRNA1P02708 AL691432.2-201ENST00000607222 2038 ntBASIC21.28■■□□□ 1
CHRNA1P02708 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHRNA1P02708 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CHRNA1P02708 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.28■■□□□ 1
CHRNA1P02708 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.28■■□□□ 1
CHRNA1P02708 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.28■■□□□ 1
CHRNA1P02708 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CHRNA1P02708 AC022616.7-201ENST00000525383 220 ntBASIC21.28■■□□□ 1
CHRNA1P02708 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.28■■□□□ 1
CHRNA1P02708 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.28■■□□□ 1
CHRNA1P02708 AC010653.2-201ENST00000623505 997 ntBASIC21.28■■□□□ 1
CHRNA1P02708 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CHRNA1P02708 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.28■■□□□ 1
CHRNA1P02708 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHRNA1P02708 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.28■■□□□ 1
CHRNA1P02708 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHRNA1P02708 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHRNA1P02708 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CHRNA1P02708 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHRNA1P02708 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHRNA1P02708 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHRNA1P02708 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.27■■□□□ 1
CHRNA1P02708 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHRNA1P02708 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
CHRNA1P02708 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.27■■□□□ 1
CHRNA1P02708 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.27■■□□□ 1
CHRNA1P02708 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHRNA1P02708 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CHRNA1P02708 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.27■■□□□ 1
CHRNA1P02708 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHRNA1P02708 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHRNA1P02708 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CHRNA1P02708 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms