Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PGK1P00558 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PGK1P00558 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.81■■□□□ 1.08
PGK1P00558 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PGK1P00558 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.81■■□□□ 1.08
PGK1P00558 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.81■■□□□ 1.08
PGK1P00558 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PGK1P00558 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.81■■□□□ 1.08
PGK1P00558 AL353719.1-201ENST00000566847 864 ntBASIC21.81■■□□□ 1.08
PGK1P00558 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.81■■□□□ 1.08
PGK1P00558 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PGK1P00558 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
PGK1P00558 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.8■■□□□ 1.08
PGK1P00558 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PGK1P00558 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PGK1P00558 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PGK1P00558 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PGK1P00558 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PGK1P00558 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PGK1P00558 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PGK1P00558 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PGK1P00558 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.8■■□□□ 1.08
PGK1P00558 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.8■■□□□ 1.08
PGK1P00558 TSPY17P-201ENST00000450329 467 ntBASIC21.8■■□□□ 1.08
PGK1P00558 AL359075.1-203ENST00000462729 1002 ntBASIC21.8■■□□□ 1.08
PGK1P00558 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.8■■□□□ 1.08
PGK1P00558 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PGK1P00558 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.8■■□□□ 1.08
PGK1P00558 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.8■■□□□ 1.08
PGK1P00558 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PGK1P00558 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
PGK1P00558 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PGK1P00558 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PGK1P00558 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.8■■□□□ 1.08
PGK1P00558 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PGK1P00558 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PGK1P00558 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.79■■□□□ 1.08
PGK1P00558 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.79■■□□□ 1.08
PGK1P00558 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PGK1P00558 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PGK1P00558 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.79■■□□□ 1.08
PGK1P00558 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PGK1P00558 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PGK1P00558 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PGK1P00558 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PGK1P00558 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.79■■□□□ 1.08
PGK1P00558 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PGK1P00558 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.79■■□□□ 1.08
PGK1P00558 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.79■■□□□ 1.08
PGK1P00558 AC093458.2-201ENST00000623150 629 ntBASIC21.79■■□□□ 1.08
PGK1P00558 AL023973.1-201ENST00000624619 620 ntBASIC21.79■■□□□ 1.08
PGK1P00558 AL121956.5-201ENST00000625261 221 ntBASIC21.79■■□□□ 1.08
PGK1P00558 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PGK1P00558 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.79■■□□□ 1.08
PGK1P00558 KRT8P8-201ENST00000434750 1448 ntBASIC21.79■■□□□ 1.08
PGK1P00558 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PGK1P00558 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PGK1P00558 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
PGK1P00558 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PGK1P00558 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
PGK1P00558 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.78■■□□□ 1.08
PGK1P00558 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.78■■□□□ 1.08
PGK1P00558 IER3-202ENST00000376377 1350 ntBASIC21.78■■□□□ 1.08
PGK1P00558 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PGK1P00558 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.78■■□□□ 1.08
PGK1P00558 KRT18P48-201ENST00000434763 852 ntBASIC21.78■■□□□ 1.08
PGK1P00558 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.78■■□□□ 1.08
PGK1P00558 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PGK1P00558 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.78■■□□□ 1.08
PGK1P00558 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.78■■□□□ 1.08
PGK1P00558 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.78■■□□□ 1.08
PGK1P00558 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.78■■□□□ 1.08
PGK1P00558 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.78■■□□□ 1.08
PGK1P00558 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.78■■□□□ 1.08
PGK1P00558 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PGK1P00558 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PGK1P00558 LINC01465-201ENST00000408887 1940 ntBASIC21.78■■□□□ 1.08
PGK1P00558 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PGK1P00558 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PGK1P00558 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.78■■□□□ 1.08
PGK1P00558 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PGK1P00558 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PGK1P00558 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PGK1P00558 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.77■■□□□ 1.08
PGK1P00558 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
PGK1P00558 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PGK1P00558 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PGK1P00558 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PGK1P00558 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PGK1P00558 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.77■■□□□ 1.08
PGK1P00558 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.77■■□□□ 1.08
PGK1P00558 AL441883.1-201ENST00000566170 1045 ntBASIC21.77■■□□□ 1.08
PGK1P00558 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.77■■□□□ 1.08
PGK1P00558 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
PGK1P00558 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PGK1P00558 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.76■■□□□ 1.07
PGK1P00558 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PGK1P00558 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PGK1P00558 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.76■■□□□ 1.07
PGK1P00558 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms