Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
RAPGEF3O95398 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC29.46■■■□□ 2.31
RAPGEF3O95398 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC29.46■■■□□ 2.31
RAPGEF3O95398 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
RAPGEF3O95398 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
RAPGEF3O95398 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
RAPGEF3O95398 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
RAPGEF3O95398 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
RAPGEF3O95398 PHB2-202ENST00000440277 996 ntTSL 5 BASIC29.46■■■□□ 2.31
RAPGEF3O95398 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC29.46■■■□□ 2.31
RAPGEF3O95398 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
RAPGEF3O95398 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
RAPGEF3O95398 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC29.46■■■□□ 2.31
RAPGEF3O95398 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
RAPGEF3O95398 AL024507.2-201ENST00000606070 2574 ntBASIC29.46■■■□□ 2.31
RAPGEF3O95398 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
RAPGEF3O95398 TMEM179-206ENST00000616017 1645 ntBASIC29.45■■■□□ 2.31
RAPGEF3O95398 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC29.45■■■□□ 2.31
RAPGEF3O95398 AL049796.1-201ENST00000565336 1766 ntBASIC29.45■■■□□ 2.31
RAPGEF3O95398 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC29.45■■■□□ 2.31
RAPGEF3O95398 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
RAPGEF3O95398 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
RAPGEF3O95398 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
RAPGEF3O95398 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
RAPGEF3O95398 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC29.45■■■□□ 2.31
RAPGEF3O95398 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
RAPGEF3O95398 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
RAPGEF3O95398 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC29.45■■■□□ 2.3
RAPGEF3O95398 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
RAPGEF3O95398 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
RAPGEF3O95398 GUSBP5-202ENST00000510805 1989 ntBASIC29.44■■■□□ 2.3
RAPGEF3O95398 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
RAPGEF3O95398 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RAPGEF3O95398 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RAPGEF3O95398 LINC01465-201ENST00000408887 1940 ntBASIC29.44■■■□□ 2.3
RAPGEF3O95398 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC29.44■■■□□ 2.3
RAPGEF3O95398 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RAPGEF3O95398 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC29.44■■■□□ 2.3
RAPGEF3O95398 AC092597.1-201ENST00000487352 616 ntBASIC29.44■■■□□ 2.3
RAPGEF3O95398 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC29.44■■■□□ 2.3
RAPGEF3O95398 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC29.44■■■□□ 2.3
RAPGEF3O95398 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC29.44■■■□□ 2.3
RAPGEF3O95398 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
RAPGEF3O95398 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RAPGEF3O95398 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RAPGEF3O95398 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
RAPGEF3O95398 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
RAPGEF3O95398 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
RAPGEF3O95398 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC29.43■■■□□ 2.3
RAPGEF3O95398 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC29.43■■■□□ 2.3
RAPGEF3O95398 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
RAPGEF3O95398 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC29.43■■■□□ 2.3
RAPGEF3O95398 AL160286.2-201ENST00000567150 934 ntBASIC29.43■■■□□ 2.3
RAPGEF3O95398 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC29.43■■■□□ 2.3
RAPGEF3O95398 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
RAPGEF3O95398 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
RAPGEF3O95398 AC244015.2-201ENST00000616358 1861 ntBASIC29.42■■■□□ 2.3
RAPGEF3O95398 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
RAPGEF3O95398 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
RAPGEF3O95398 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC29.42■■■□□ 2.3
RAPGEF3O95398 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
RAPGEF3O95398 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
RAPGEF3O95398 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
RAPGEF3O95398 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
RAPGEF3O95398 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
RAPGEF3O95398 Z98882.1-201ENST00000622160 2253 ntBASIC29.41■■■□□ 2.3
RAPGEF3O95398 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
RAPGEF3O95398 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RAPGEF3O95398 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
RAPGEF3O95398 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
RAPGEF3O95398 AC079781.3-201ENST00000449110 356 ntBASIC29.41■■■□□ 2.3
RAPGEF3O95398 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC29.41■■■□□ 2.3
RAPGEF3O95398 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC29.41■■■□□ 2.3
RAPGEF3O95398 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC29.41■■■□□ 2.3
RAPGEF3O95398 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC29.41■■■□□ 2.3
RAPGEF3O95398 AL732292.2-201ENST00000609649 430 ntBASIC29.41■■■□□ 2.3
RAPGEF3O95398 BX119927.1-201ENST00000636596 1552 ntBASIC29.41■■■□□ 2.3
RAPGEF3O95398 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
RAPGEF3O95398 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
RAPGEF3O95398 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RAPGEF3O95398 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC29.4■■■□□ 2.3
RAPGEF3O95398 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RAPGEF3O95398 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
RAPGEF3O95398 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC29.4■■■□□ 2.3
RAPGEF3O95398 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
RAPGEF3O95398 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC29.4■■■□□ 2.3
RAPGEF3O95398 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC29.4■■■□□ 2.3
RAPGEF3O95398 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC29.4■■■□□ 2.3
RAPGEF3O95398 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC29.4■■■□□ 2.3
RAPGEF3O95398 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RAPGEF3O95398 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
RAPGEF3O95398 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC29.4■■■□□ 2.3
RAPGEF3O95398 KRT8P41-201ENST00000533985 1514 ntBASIC29.4■■■□□ 2.3
RAPGEF3O95398 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RAPGEF3O95398 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
RAPGEF3O95398 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RAPGEF3O95398 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RAPGEF3O95398 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RAPGEF3O95398 KRT8P8-201ENST00000434750 1448 ntBASIC29.39■■■□□ 2.3
RAPGEF3O95398 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms