Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
NKX2-2O95096 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
NKX2-2O95096 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NKX2-2O95096 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NKX2-2O95096 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-2O95096 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-2O95096 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-2O95096 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.06■□□□□ 0.48
NKX2-2O95096 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.06■□□□□ 0.48
NKX2-2O95096 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.06■□□□□ 0.48
NKX2-2O95096 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-2O95096 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
NKX2-2O95096 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-2O95096 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.06■□□□□ 0.48
NKX2-2O95096 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.06■□□□□ 0.48
NKX2-2O95096 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-2O95096 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.06■□□□□ 0.48
NKX2-2O95096 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.06■□□□□ 0.48
NKX2-2O95096 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.06■□□□□ 0.48
NKX2-2O95096 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.06■□□□□ 0.48
NKX2-2O95096 MIR4651-201ENST00000582622 73 ntBASIC18.06■□□□□ 0.48
NKX2-2O95096 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.06■□□□□ 0.48
NKX2-2O95096 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.06■□□□□ 0.48
NKX2-2O95096 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-2O95096 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-2O95096 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-2O95096 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NKX2-2O95096 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-2O95096 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-2O95096 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
NKX2-2O95096 AC005332.7-201ENST00000614046 2005 ntBASIC18.06■□□□□ 0.48
NKX2-2O95096 NBPF21P-201ENST00000425093 1451 ntBASIC18.06■□□□□ 0.48
NKX2-2O95096 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-2O95096 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-2O95096 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NKX2-2O95096 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.05■□□□□ 0.48
NKX2-2O95096 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.05■□□□□ 0.48
NKX2-2O95096 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NKX2-2O95096 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NKX2-2O95096 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NKX2-2O95096 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NKX2-2O95096 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.05■□□□□ 0.48
NKX2-2O95096 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
NKX2-2O95096 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.05■□□□□ 0.48
NKX2-2O95096 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NKX2-2O95096 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NKX2-2O95096 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.05■□□□□ 0.48
NKX2-2O95096 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
NKX2-2O95096 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NKX2-2O95096 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NKX2-2O95096 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.05■□□□□ 0.48
NKX2-2O95096 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NKX2-2O95096 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NKX2-2O95096 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NKX2-2O95096 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NKX2-2O95096 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.04■□□□□ 0.48
NKX2-2O95096 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NKX2-2O95096 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NKX2-2O95096 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.04■□□□□ 0.48
NKX2-2O95096 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NKX2-2O95096 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NKX2-2O95096 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NKX2-2O95096 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
NKX2-2O95096 POU5F1P3-201ENST00000428824 1078 ntBASIC18.04■□□□□ 0.48
NKX2-2O95096 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.04■□□□□ 0.48
NKX2-2O95096 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NKX2-2O95096 AC006058.3-201ENST00000606217 1069 ntBASIC18.04■□□□□ 0.48
NKX2-2O95096 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.04■□□□□ 0.48
NKX2-2O95096 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NKX2-2O95096 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NKX2-2O95096 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.04■□□□□ 0.48
NKX2-2O95096 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
NKX2-2O95096 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.04■□□□□ 0.48
NKX2-2O95096 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NKX2-2O95096 ZNF815P-204ENST00000434898 1737 ntBASIC18.03■□□□□ 0.48
NKX2-2O95096 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX2-2O95096 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX2-2O95096 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX2-2O95096 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
NKX2-2O95096 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.03■□□□□ 0.48
NKX2-2O95096 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX2-2O95096 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NKX2-2O95096 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX2-2O95096 AC007952.6-201ENST00000573168 2673 ntBASIC18.03■□□□□ 0.48
NKX2-2O95096 AC003957.1-201ENST00000625108 2673 ntBASIC18.03■□□□□ 0.48
NKX2-2O95096 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.03■□□□□ 0.48
NKX2-2O95096 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.03■□□□□ 0.48
NKX2-2O95096 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.03■□□□□ 0.48
NKX2-2O95096 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
NKX2-2O95096 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX2-2O95096 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.03■□□□□ 0.48
NKX2-2O95096 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.03■□□□□ 0.48
NKX2-2O95096 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.03■□□□□ 0.48
NKX2-2O95096 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.03■□□□□ 0.48
NKX2-2O95096 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX2-2O95096 RN7SL471P-201ENST00000580476 299 ntBASIC18.03■□□□□ 0.48
NKX2-2O95096 AC073648.6-201ENST00000641589 218 ntBASIC18.03■□□□□ 0.48
NKX2-2O95096 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
NKX2-2O95096 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
NKX2-2O95096 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms