Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
USH2AO75445 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
USH2AO75445 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
USH2AO75445 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
USH2AO75445 HBZP1-201ENST00000354915 429 ntBASIC8.76□□□□□ -1.01
USH2AO75445 RPSAP43-201ENST00000402237 625 ntBASIC8.76□□□□□ -1.01
USH2AO75445 MIR1233-2-201ENST00000408138 82 ntBASIC8.76□□□□□ -1.01
USH2AO75445 MIR1233-1-201ENST00000408722 82 ntBASIC8.76□□□□□ -1.01
USH2AO75445 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC8.76□□□□□ -1.01
USH2AO75445 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
USH2AO75445 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
USH2AO75445 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
USH2AO75445 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
USH2AO75445 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
USH2AO75445 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
USH2AO75445 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
USH2AO75445 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
USH2AO75445 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
USH2AO75445 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
USH2AO75445 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
USH2AO75445 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC8.76□□□□□ -1.01
USH2AO75445 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
USH2AO75445 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC8.76□□□□□ -1.01
USH2AO75445 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC8.76□□□□□ -1.01
USH2AO75445 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
USH2AO75445 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
USH2AO75445 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
USH2AO75445 FABP5-202ENST00000396359 986 ntTSL 5 BASIC8.76□□□□□ -1.01
USH2AO75445 STARP1-201ENST00000397973 869 ntBASIC8.76□□□□□ -1.01
USH2AO75445 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
USH2AO75445 AL121912.1-201ENST00000603683 238 ntBASIC8.76□□□□□ -1.01
USH2AO75445 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC8.76□□□□□ -1.01
USH2AO75445 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
USH2AO75445 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
USH2AO75445 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
USH2AO75445 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
USH2AO75445 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC8.76□□□□□ -1.01
USH2AO75445 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC8.76□□□□□ -1.01
USH2AO75445 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
USH2AO75445 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC8.76□□□□□ -1.01
USH2AO75445 KRT16P6-202ENST00000425692 1426 ntBASIC8.76□□□□□ -1.01
USH2AO75445 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC8.76□□□□□ -1.01
USH2AO75445 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
USH2AO75445 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
USH2AO75445 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
USH2AO75445 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
USH2AO75445 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
USH2AO75445 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
USH2AO75445 AP006587.1-201ENST00000534129 1502 ntBASIC8.75□□□□□ -1.01
USH2AO75445 GOLGA6L3-201ENST00000507199 1679 ntBASIC8.75□□□□□ -1.01
USH2AO75445 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
USH2AO75445 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
USH2AO75445 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
USH2AO75445 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
USH2AO75445 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
USH2AO75445 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
USH2AO75445 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
USH2AO75445 GGCT-205ENST00000409436 954 ntTSL 3 BASIC8.75□□□□□ -1.01
USH2AO75445 TSPY22P-201ENST00000427496 604 ntBASIC8.75□□□□□ -1.01
USH2AO75445 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
USH2AO75445 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC8.75□□□□□ -1.01
USH2AO75445 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC8.75□□□□□ -1.01
USH2AO75445 MPI-205ENST00000562606 1052 ntTSL 3 BASIC8.75□□□□□ -1.01
USH2AO75445 AC106730.1-201ENST00000566722 1090 ntBASIC8.75□□□□□ -1.01
USH2AO75445 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC8.75□□□□□ -1.01
USH2AO75445 TK1-205ENST00000590862 642 ntTSL 3 BASIC8.75□□□□□ -1.01
USH2AO75445 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
USH2AO75445 REXO1L6P-202ENST00000619970 1078 ntBASIC8.75□□□□□ -1.01
USH2AO75445 AC131212.4-201ENST00000623606 975 ntBASIC8.75□□□□□ -1.01
USH2AO75445 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC8.75□□□□□ -1.01
USH2AO75445 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
USH2AO75445 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC8.75□□□□□ -1.01
USH2AO75445 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
USH2AO75445 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
USH2AO75445 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
USH2AO75445 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC8.75□□□□□ -1.01
USH2AO75445 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC8.75□□□□□ -1.01
USH2AO75445 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
USH2AO75445 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
USH2AO75445 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
USH2AO75445 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC8.75□□□□□ -1.01
USH2AO75445 PGAM5P1-201ENST00000518923 814 ntBASIC8.75□□□□□ -1.01
USH2AO75445 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC8.75□□□□□ -1.01
USH2AO75445 PRR29-209ENST00000582540 967 ntTSL 2 BASIC8.75□□□□□ -1.01
USH2AO75445 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC8.75□□□□□ -1.01
USH2AO75445 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
USH2AO75445 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
USH2AO75445 AC243591.1-201ENST00000452967 1364 ntBASIC8.75□□□□□ -1.01
USH2AO75445 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC8.75□□□□□ -1.01
USH2AO75445 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC8.75□□□□□ -1.01
USH2AO75445 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC8.75□□□□□ -1.01
USH2AO75445 AC148477.8-201ENST00000624298 468 ntBASIC8.75□□□□□ -1.01
USH2AO75445 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC8.75□□□□□ -1.01
USH2AO75445 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC8.75□□□□□ -1.01
USH2AO75445 PTBP1P-201ENST00000554374 1601 ntBASIC8.75□□□□□ -1.01
USH2AO75445 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
USH2AO75445 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
USH2AO75445 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
USH2AO75445 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
USH2AO75445 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms