Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RNF40O75150 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF40O75150 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF40O75150 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF40O75150 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF40O75150 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
RNF40O75150 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF40O75150 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF40O75150 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF40O75150 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF40O75150 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RNF40O75150 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.03■□□□□ 0.96
RNF40O75150 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF40O75150 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF40O75150 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF40O75150 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.03■□□□□ 0.96
RNF40O75150 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF40O75150 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF40O75150 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF40O75150 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF40O75150 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF40O75150 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF40O75150 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RNF40O75150 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF40O75150 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF40O75150 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF40O75150 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF40O75150 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF40O75150 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
RNF40O75150 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF40O75150 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.02■□□□□ 0.96
RNF40O75150 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF40O75150 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF40O75150 SOX15-203ENST00000570788 1093 ntBASIC21.02■□□□□ 0.96
RNF40O75150 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.02■□□□□ 0.96
RNF40O75150 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF40O75150 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RNF40O75150 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.02■□□□□ 0.96
RNF40O75150 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF40O75150 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RNF40O75150 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF40O75150 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RNF40O75150 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.02■□□□□ 0.96
RNF40O75150 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.02■□□□□ 0.95
RNF40O75150 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.02■□□□□ 0.95
RNF40O75150 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RNF40O75150 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF40O75150 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RNF40O75150 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF40O75150 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF40O75150 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF40O75150 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
RNF40O75150 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF40O75150 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF40O75150 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF40O75150 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF40O75150 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF40O75150 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF40O75150 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF40O75150 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.01■□□□□ 0.95
RNF40O75150 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF40O75150 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.01■□□□□ 0.95
RNF40O75150 AC233263.1-201ENST00000578059 224 ntBASIC21.01■□□□□ 0.95
RNF40O75150 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF40O75150 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF40O75150 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF40O75150 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF40O75150 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF40O75150 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF40O75150 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF40O75150 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF40O75150 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF40O75150 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
RNF40O75150 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RNF40O75150 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF40O75150 CYP21A1P-202ENST00000354927 1481 ntBASIC21.01■□□□□ 0.95
RNF40O75150 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF40O75150 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF40O75150 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF40O75150 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21■□□□□ 0.95
RNF40O75150 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF40O75150 MIR718-201ENST00000390190 70 ntBASIC21■□□□□ 0.95
RNF40O75150 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF40O75150 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21■□□□□ 0.95
RNF40O75150 HES2-205ENST00000487437 968 ntTSL 3 BASIC21■□□□□ 0.95
RNF40O75150 SLC29A4P2-201ENST00000504749 1089 ntBASIC21■□□□□ 0.95
RNF40O75150 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21■□□□□ 0.95
RNF40O75150 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21■□□□□ 0.95
RNF40O75150 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF40O75150 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF40O75150 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF40O75150 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
RNF40O75150 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
RNF40O75150 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF40O75150 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RNF40O75150 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.99■□□□□ 0.95
RNF40O75150 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RNF40O75150 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF40O75150 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF40O75150 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms