Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.24■□□□□ 0.51
HCN1O60741 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.24■□□□□ 0.51
HCN1O60741 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.24■□□□□ 0.51
HCN1O60741 AC120498.8-201ENST00000614275 531 ntBASIC18.24■□□□□ 0.51
HCN1O60741 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HCN1O60741 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
HCN1O60741 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HCN1O60741 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
HCN1O60741 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HCN1O60741 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HCN1O60741 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.24■□□□□ 0.51
HCN1O60741 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.24■□□□□ 0.51
HCN1O60741 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
HCN1O60741 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HCN1O60741 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HCN1O60741 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
HCN1O60741 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HCN1O60741 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HCN1O60741 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HCN1O60741 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.23■□□□□ 0.51
HCN1O60741 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.23■□□□□ 0.51
HCN1O60741 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.23■□□□□ 0.51
HCN1O60741 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.23■□□□□ 0.51
HCN1O60741 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HCN1O60741 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HCN1O60741 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HCN1O60741 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.23■□□□□ 0.51
HCN1O60741 RPPH1-201ENST00000516869 333 ntBASIC18.23■□□□□ 0.51
HCN1O60741 AC023632.3-201ENST00000521633 145 ntBASIC18.23■□□□□ 0.51
HCN1O60741 C1QBPP2-201ENST00000528754 825 ntBASIC18.23■□□□□ 0.51
HCN1O60741 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.23■□□□□ 0.51
HCN1O60741 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HCN1O60741 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HCN1O60741 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
HCN1O60741 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.23■□□□□ 0.51
HCN1O60741 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.23■□□□□ 0.51
HCN1O60741 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HCN1O60741 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HCN1O60741 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HCN1O60741 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
HCN1O60741 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
HCN1O60741 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
HCN1O60741 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HCN1O60741 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HCN1O60741 BX119927.1-201ENST00000636596 1552 ntBASIC18.22■□□□□ 0.51
HCN1O60741 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
HCN1O60741 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HCN1O60741 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.22■□□□□ 0.51
HCN1O60741 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HCN1O60741 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HCN1O60741 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HCN1O60741 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.22■□□□□ 0.51
HCN1O60741 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.22■□□□□ 0.51
HCN1O60741 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
HCN1O60741 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.22■□□□□ 0.51
HCN1O60741 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.22■□□□□ 0.51
HCN1O60741 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HCN1O60741 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HCN1O60741 FAM197Y4-202ENST00000622692 608 ntBASIC18.22■□□□□ 0.51
HCN1O60741 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
HCN1O60741 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
HCN1O60741 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HCN1O60741 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.22■□□□□ 0.51
HCN1O60741 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
HCN1O60741 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HCN1O60741 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.22■□□□□ 0.51
HCN1O60741 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
HCN1O60741 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.22■□□□□ 0.51
HCN1O60741 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
HCN1O60741 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HCN1O60741 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HCN1O60741 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.22■□□□□ 0.51
HCN1O60741 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HCN1O60741 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HCN1O60741 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.21■□□□□ 0.51
HCN1O60741 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
HCN1O60741 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HCN1O60741 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.21■□□□□ 0.51
HCN1O60741 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.21■□□□□ 0.51
HCN1O60741 TMEM179-206ENST00000616017 1645 ntBASIC18.21■□□□□ 0.51
HCN1O60741 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HCN1O60741 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.21■□□□□ 0.51
HCN1O60741 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.21■□□□□ 0.51
HCN1O60741 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HCN1O60741 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.21■□□□□ 0.51
HCN1O60741 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HCN1O60741 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HCN1O60741 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.21■□□□□ 0.51
HCN1O60741 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.21■□□□□ 0.51
HCN1O60741 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.21■□□□□ 0.51
HCN1O60741 AC006557.6-201ENST00000623071 864 ntBASIC18.21■□□□□ 0.51
HCN1O60741 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HCN1O60741 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.21■□□□□ 0.51
HCN1O60741 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HCN1O60741 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HCN1O60741 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
HCN1O60741 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HCN1O60741 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.21■□□□□ 0.5
HCN1O60741 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCN1O60741 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms