Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSX5O60225 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSX5O60225 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSX5O60225 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SSX5O60225 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSX5O60225 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSX5O60225 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.72■□□□□ 0.27
SSX5O60225 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSX5O60225 AC142381.2-201ENST00000566120 298 ntBASIC16.72■□□□□ 0.27
SSX5O60225 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.72■□□□□ 0.27
SSX5O60225 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SSX5O60225 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
SSX5O60225 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSX5O60225 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSX5O60225 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSX5O60225 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSX5O60225 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSX5O60225 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.72■□□□□ 0.27
SSX5O60225 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SSX5O60225 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSX5O60225 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSX5O60225 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSX5O60225 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.72■□□□□ 0.27
SSX5O60225 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SSX5O60225 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSX5O60225 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
SSX5O60225 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSX5O60225 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSX5O60225 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSX5O60225 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.71■□□□□ 0.27
SSX5O60225 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSX5O60225 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSX5O60225 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SSX5O60225 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSX5O60225 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSX5O60225 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
SSX5O60225 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SSX5O60225 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.71■□□□□ 0.27
SSX5O60225 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.71■□□□□ 0.27
SSX5O60225 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSX5O60225 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SSX5O60225 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SSX5O60225 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.71■□□□□ 0.27
SSX5O60225 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SSX5O60225 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
SSX5O60225 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
SSX5O60225 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSX5O60225 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.7■□□□□ 0.26
SSX5O60225 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.7■□□□□ 0.26
SSX5O60225 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSX5O60225 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSX5O60225 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSX5O60225 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSX5O60225 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSX5O60225 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSX5O60225 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSX5O60225 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSX5O60225 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSX5O60225 AP001271.2-201ENST00000624018 1556 ntBASIC16.7■□□□□ 0.26
SSX5O60225 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSX5O60225 AC123595.1-201ENST00000440769 1046 ntBASIC16.7■□□□□ 0.26
SSX5O60225 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.7■□□□□ 0.26
SSX5O60225 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSX5O60225 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.7■□□□□ 0.26
SSX5O60225 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSX5O60225 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSX5O60225 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSX5O60225 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.7■□□□□ 0.26
SSX5O60225 AL138781.2-201ENST00000617896 1843 ntBASIC16.7■□□□□ 0.26
SSX5O60225 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSX5O60225 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSX5O60225 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSX5O60225 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSX5O60225 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.69■□□□□ 0.26
SSX5O60225 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.69■□□□□ 0.26
SSX5O60225 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX5O60225 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX5O60225 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSX5O60225 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
SSX5O60225 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.69■□□□□ 0.26
SSX5O60225 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX5O60225 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSX5O60225 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX5O60225 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSX5O60225 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX5O60225 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSX5O60225 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
SSX5O60225 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.69■□□□□ 0.26
SSX5O60225 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSX5O60225 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX5O60225 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX5O60225 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX5O60225 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.69■□□□□ 0.26
SSX5O60225 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX5O60225 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSX5O60225 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SSX5O60225 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.69■□□□□ 0.26
SSX5O60225 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSX5O60225 KRT16P6-202ENST00000425692 1426 ntBASIC16.69■□□□□ 0.26
SSX5O60225 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms