Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAF3IP2O43734 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.43■□□□□ 0.38
TRAF3IP2O43734 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAF3IP2O43734 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP2O43734 MTDHP1-201ENST00000605323 784 ntBASIC17.43■□□□□ 0.38
TRAF3IP2O43734 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.43■□□□□ 0.38
TRAF3IP2O43734 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
TRAF3IP2O43734 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP2O43734 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TRAF3IP2O43734 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAF3IP2O43734 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP2O43734 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TRAF3IP2O43734 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP2O43734 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TRAF3IP2O43734 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP2O43734 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP2O43734 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
TRAF3IP2O43734 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRAF3IP2O43734 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAF3IP2O43734 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAF3IP2O43734 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAF3IP2O43734 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TRAF3IP2O43734 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAF3IP2O43734 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAF3IP2O43734 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAF3IP2O43734 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAF3IP2O43734 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAF3IP2O43734 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAF3IP2O43734 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAF3IP2O43734 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAF3IP2O43734 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAF3IP2O43734 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAF3IP2O43734 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.42■□□□□ 0.38
TRAF3IP2O43734 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAF3IP2O43734 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TRAF3IP2O43734 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAF3IP2O43734 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAF3IP2O43734 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAF3IP2O43734 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAF3IP2O43734 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRAF3IP2O43734 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRAF3IP2O43734 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAF3IP2O43734 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAF3IP2O43734 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAF3IP2O43734 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP2O43734 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP2O43734 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAF3IP2O43734 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAF3IP2O43734 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP2O43734 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP2O43734 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
TRAF3IP2O43734 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP2O43734 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP2O43734 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TRAF3IP2O43734 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP2O43734 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP2O43734 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
TRAF3IP2O43734 KRT18P16-201ENST00000510337 1294 ntBASIC17.41■□□□□ 0.38
TRAF3IP2O43734 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.41■□□□□ 0.38
TRAF3IP2O43734 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.41■□□□□ 0.38
TRAF3IP2O43734 PRKY-204ENST00000533551 1019 ntBASIC17.41■□□□□ 0.38
TRAF3IP2O43734 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.41■□□□□ 0.38
TRAF3IP2O43734 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAF3IP2O43734 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP2O43734 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP2O43734 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAF3IP2O43734 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAF3IP2O43734 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAF3IP2O43734 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP2O43734 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
TRAF3IP2O43734 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP2O43734 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP2O43734 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 POU5F1P3-201ENST00000428824 1078 ntBASIC17.4■□□□□ 0.38
TRAF3IP2O43734 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 AC006058.3-201ENST00000606217 1069 ntBASIC17.4■□□□□ 0.38
TRAF3IP2O43734 AC073648.6-201ENST00000641589 218 ntBASIC17.4■□□□□ 0.38
TRAF3IP2O43734 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms