Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
KDELR3O43731 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
KDELR3O43731 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KDELR3O43731 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.88■□□□□ 0.77
KDELR3O43731 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.88■□□□□ 0.77
KDELR3O43731 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KDELR3O43731 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KDELR3O43731 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KDELR3O43731 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KDELR3O43731 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.88■□□□□ 0.77
KDELR3O43731 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.88■□□□□ 0.77
KDELR3O43731 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
KDELR3O43731 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.88■□□□□ 0.77
KDELR3O43731 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KDELR3O43731 AC093827.2-201ENST00000512654 315 ntBASIC19.88■□□□□ 0.77
KDELR3O43731 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.88■□□□□ 0.77
KDELR3O43731 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
KDELR3O43731 AP001412.1-201ENST00000608405 714 ntBASIC19.88■□□□□ 0.77
KDELR3O43731 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KDELR3O43731 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.88■□□□□ 0.77
KDELR3O43731 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KDELR3O43731 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KDELR3O43731 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KDELR3O43731 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KDELR3O43731 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KDELR3O43731 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KDELR3O43731 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
KDELR3O43731 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.87■□□□□ 0.77
KDELR3O43731 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
KDELR3O43731 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KDELR3O43731 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KDELR3O43731 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
KDELR3O43731 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.87■□□□□ 0.77
KDELR3O43731 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
KDELR3O43731 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KDELR3O43731 NIFKP9-201ENST00000419265 221 ntBASIC19.87■□□□□ 0.77
KDELR3O43731 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.87■□□□□ 0.77
KDELR3O43731 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KDELR3O43731 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.87■□□□□ 0.77
KDELR3O43731 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.87■□□□□ 0.77
KDELR3O43731 AC073195.1-201ENST00000607241 877 ntBASIC19.87■□□□□ 0.77
KDELR3O43731 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.87■□□□□ 0.77
KDELR3O43731 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KDELR3O43731 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
KDELR3O43731 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
KDELR3O43731 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KDELR3O43731 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
KDELR3O43731 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
KDELR3O43731 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KDELR3O43731 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KDELR3O43731 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.86■□□□□ 0.77
KDELR3O43731 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KDELR3O43731 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KDELR3O43731 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KDELR3O43731 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KDELR3O43731 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.86■□□□□ 0.77
KDELR3O43731 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.86■□□□□ 0.77
KDELR3O43731 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.86■□□□□ 0.77
KDELR3O43731 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.86■□□□□ 0.77
KDELR3O43731 AL049637.2-201ENST00000641778 930 ntBASIC19.86■□□□□ 0.77
KDELR3O43731 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.86■□□□□ 0.77
KDELR3O43731 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KDELR3O43731 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.86■□□□□ 0.77
KDELR3O43731 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.86■□□□□ 0.77
KDELR3O43731 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
KDELR3O43731 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
KDELR3O43731 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.86■□□□□ 0.77
KDELR3O43731 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KDELR3O43731 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
KDELR3O43731 TREX1-205ENST00000625293 1783 ntBASIC19.85■□□□□ 0.77
KDELR3O43731 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KDELR3O43731 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KDELR3O43731 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KDELR3O43731 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KDELR3O43731 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KDELR3O43731 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.85■□□□□ 0.77
KDELR3O43731 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KDELR3O43731 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.85■□□□□ 0.77
KDELR3O43731 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
KDELR3O43731 KSR1P1-201ENST00000446298 240 ntBASIC19.85■□□□□ 0.77
KDELR3O43731 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
KDELR3O43731 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KDELR3O43731 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KDELR3O43731 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KDELR3O43731 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.85■□□□□ 0.77
KDELR3O43731 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.85■□□□□ 0.77
KDELR3O43731 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KDELR3O43731 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KDELR3O43731 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
KDELR3O43731 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KDELR3O43731 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KDELR3O43731 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.85■□□□□ 0.77
KDELR3O43731 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KDELR3O43731 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
KDELR3O43731 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
KDELR3O43731 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KDELR3O43731 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KDELR3O43731 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.84■□□□□ 0.77
KDELR3O43731 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KDELR3O43731 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms