Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDB2O43679 AC005332.7-201ENST00000614046 2005 ntBASIC19.57■□□□□ 0.72
LDB2O43679 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDB2O43679 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
LDB2O43679 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LDB2O43679 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDB2O43679 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LDB2O43679 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LDB2O43679 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LDB2O43679 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LDB2O43679 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.56■□□□□ 0.72
LDB2O43679 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.56■□□□□ 0.72
LDB2O43679 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
LDB2O43679 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LDB2O43679 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
LDB2O43679 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LDB2O43679 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LDB2O43679 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.56■□□□□ 0.72
LDB2O43679 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LDB2O43679 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.56■□□□□ 0.72
LDB2O43679 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
LDB2O43679 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.56■□□□□ 0.72
LDB2O43679 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LDB2O43679 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
LDB2O43679 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LDB2O43679 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LDB2O43679 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LDB2O43679 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LDB2O43679 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LDB2O43679 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LDB2O43679 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LDB2O43679 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LDB2O43679 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.55■□□□□ 0.72
LDB2O43679 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.55■□□□□ 0.72
LDB2O43679 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LDB2O43679 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.55■□□□□ 0.72
LDB2O43679 FAM201B-201ENST00000458407 597 ntBASIC19.55■□□□□ 0.72
LDB2O43679 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.55■□□□□ 0.72
LDB2O43679 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.55■□□□□ 0.72
LDB2O43679 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.55■□□□□ 0.72
LDB2O43679 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.55■□□□□ 0.72
LDB2O43679 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LDB2O43679 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LDB2O43679 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LDB2O43679 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LDB2O43679 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LDB2O43679 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LDB2O43679 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LDB2O43679 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LDB2O43679 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.54■□□□□ 0.72
LDB2O43679 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LDB2O43679 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LDB2O43679 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
LDB2O43679 KRT8P8-201ENST00000434750 1448 ntBASIC19.54■□□□□ 0.72
LDB2O43679 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.54■□□□□ 0.72
LDB2O43679 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LDB2O43679 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LDB2O43679 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.54■□□□□ 0.72
LDB2O43679 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.54■□□□□ 0.72
LDB2O43679 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.54■□□□□ 0.72
LDB2O43679 PRKY-204ENST00000533551 1019 ntBASIC19.54■□□□□ 0.72
LDB2O43679 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.54■□□□□ 0.72
LDB2O43679 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
LDB2O43679 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LDB2O43679 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LDB2O43679 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
LDB2O43679 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LDB2O43679 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LDB2O43679 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
LDB2O43679 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LDB2O43679 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.54■□□□□ 0.72
LDB2O43679 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LDB2O43679 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LDB2O43679 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
LDB2O43679 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LDB2O43679 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.53■□□□□ 0.72
LDB2O43679 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LDB2O43679 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.53■□□□□ 0.72
LDB2O43679 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LDB2O43679 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.53■□□□□ 0.72
LDB2O43679 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
LDB2O43679 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LDB2O43679 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LDB2O43679 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
LDB2O43679 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LDB2O43679 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.53■□□□□ 0.72
LDB2O43679 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.53■□□□□ 0.72
LDB2O43679 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.53■□□□□ 0.72
LDB2O43679 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
LDB2O43679 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.53■□□□□ 0.72
LDB2O43679 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LDB2O43679 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LDB2O43679 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.53■□□□□ 0.72
LDB2O43679 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.52■□□□□ 0.72
LDB2O43679 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
LDB2O43679 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
LDB2O43679 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LDB2O43679 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.52■□□□□ 0.72
LDB2O43679 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.52■□□□□ 0.72
LDB2O43679 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms