Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RRP8O43159 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.4■□□□□ 0.54
RRP8O43159 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.4■□□□□ 0.54
RRP8O43159 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.4■□□□□ 0.54
RRP8O43159 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RRP8O43159 KRT8P17-201ENST00000453110 1448 ntBASIC18.4■□□□□ 0.54
RRP8O43159 AC092338.2-201ENST00000568827 1415 ntBASIC18.4■□□□□ 0.54
RRP8O43159 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RRP8O43159 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
RRP8O43159 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RRP8O43159 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.39■□□□□ 0.54
RRP8O43159 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.39■□□□□ 0.54
RRP8O43159 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RRP8O43159 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RRP8O43159 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.39■□□□□ 0.53
RRP8O43159 PTBP1P-201ENST00000554374 1601 ntBASIC18.39■□□□□ 0.53
RRP8O43159 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RRP8O43159 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RRP8O43159 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RRP8O43159 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RRP8O43159 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.39■□□□□ 0.53
RRP8O43159 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.39■□□□□ 0.53
RRP8O43159 KRT18P16-201ENST00000510337 1294 ntBASIC18.39■□□□□ 0.53
RRP8O43159 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.39■□□□□ 0.53
RRP8O43159 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.39■□□□□ 0.53
RRP8O43159 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
RRP8O43159 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.39■□□□□ 0.53
RRP8O43159 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.39■□□□□ 0.53
RRP8O43159 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RRP8O43159 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RRP8O43159 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RRP8O43159 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RRP8O43159 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.39■□□□□ 0.53
RRP8O43159 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RRP8O43159 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RRP8O43159 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.38■□□□□ 0.53
RRP8O43159 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RRP8O43159 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RRP8O43159 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RRP8O43159 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RRP8O43159 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RRP8O43159 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RRP8O43159 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.38■□□□□ 0.53
RRP8O43159 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RRP8O43159 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.38■□□□□ 0.53
RRP8O43159 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RRP8O43159 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.38■□□□□ 0.53
RRP8O43159 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RRP8O43159 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RRP8O43159 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RRP8O43159 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RRP8O43159 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RRP8O43159 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RRP8O43159 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RRP8O43159 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.38■□□□□ 0.53
RRP8O43159 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RRP8O43159 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RRP8O43159 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RRP8O43159 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.37■□□□□ 0.53
RRP8O43159 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RRP8O43159 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.37■□□□□ 0.53
RRP8O43159 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RRP8O43159 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RRP8O43159 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RRP8O43159 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RRP8O43159 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.37■□□□□ 0.53
RRP8O43159 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.37■□□□□ 0.53
RRP8O43159 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.37■□□□□ 0.53
RRP8O43159 AL136038.3-201ENST00000561909 1096 ntBASIC18.37■□□□□ 0.53
RRP8O43159 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.37■□□□□ 0.53
RRP8O43159 AC008622.2-201ENST00000617006 1229 ntBASIC18.37■□□□□ 0.53
RRP8O43159 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.37■□□□□ 0.53
RRP8O43159 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RRP8O43159 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RRP8O43159 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RRP8O43159 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.37■□□□□ 0.53
RRP8O43159 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.37■□□□□ 0.53
RRP8O43159 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RRP8O43159 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RRP8O43159 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RRP8O43159 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RRP8O43159 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RRP8O43159 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RRP8O43159 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RRP8O43159 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RRP8O43159 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RRP8O43159 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.36■□□□□ 0.53
RRP8O43159 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.36■□□□□ 0.53
RRP8O43159 AP000523.1-201ENST00000398242 1049 ntBASIC18.36■□□□□ 0.53
RRP8O43159 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.36■□□□□ 0.53
RRP8O43159 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RRP8O43159 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.36■□□□□ 0.53
RRP8O43159 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.36■□□□□ 0.53
RRP8O43159 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.36■□□□□ 0.53
RRP8O43159 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.36■□□□□ 0.53
RRP8O43159 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RRP8O43159 AL023973.1-201ENST00000624619 620 ntBASIC18.36■□□□□ 0.53
RRP8O43159 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.36■□□□□ 0.53
RRP8O43159 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RRP8O43159 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms