Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
SPTLC1O15269 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SPTLC1O15269 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.96■□□□□ 0.95
SPTLC1O15269 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPTLC1O15269 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPTLC1O15269 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SPTLC1O15269 KSR1P1-201ENST00000446298 240 ntBASIC20.96■□□□□ 0.95
SPTLC1O15269 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.96■□□□□ 0.95
SPTLC1O15269 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.96■□□□□ 0.95
SPTLC1O15269 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.96■□□□□ 0.95
SPTLC1O15269 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.96■□□□□ 0.95
SPTLC1O15269 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.96■□□□□ 0.95
SPTLC1O15269 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.96■□□□□ 0.95
SPTLC1O15269 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPTLC1O15269 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
SPTLC1O15269 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPTLC1O15269 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SPTLC1O15269 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.95■□□□□ 0.94
SPTLC1O15269 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPTLC1O15269 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SPTLC1O15269 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.95■□□□□ 0.94
SPTLC1O15269 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPTLC1O15269 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.95■□□□□ 0.94
SPTLC1O15269 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SPTLC1O15269 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.95■□□□□ 0.94
SPTLC1O15269 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPTLC1O15269 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.95■□□□□ 0.94
SPTLC1O15269 AC133561.5-201ENST00000635547 218 ntBASIC20.95■□□□□ 0.94
SPTLC1O15269 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SPTLC1O15269 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPTLC1O15269 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPTLC1O15269 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC1O15269 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC1O15269 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC1O15269 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC1O15269 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC1O15269 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC1O15269 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.94■□□□□ 0.94
SPTLC1O15269 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SPTLC1O15269 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC1O15269 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC1O15269 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.94■□□□□ 0.94
SPTLC1O15269 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC1O15269 AL355355.2-201ENST00000442321 338 ntBASIC20.94■□□□□ 0.94
SPTLC1O15269 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.94■□□□□ 0.94
SPTLC1O15269 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.94■□□□□ 0.94
SPTLC1O15269 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC1O15269 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.94■□□□□ 0.94
SPTLC1O15269 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.94■□□□□ 0.94
SPTLC1O15269 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.94■□□□□ 0.94
SPTLC1O15269 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC1O15269 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC1O15269 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SPTLC1O15269 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC1O15269 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.94■□□□□ 0.94
SPTLC1O15269 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPTLC1O15269 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
SPTLC1O15269 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SPTLC1O15269 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPTLC1O15269 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPTLC1O15269 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SPTLC1O15269 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
SPTLC1O15269 NUDT16P1-203ENST00000513809 620 ntBASIC20.93■□□□□ 0.94
SPTLC1O15269 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.93■□□□□ 0.94
SPTLC1O15269 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.93■□□□□ 0.94
SPTLC1O15269 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.93■□□□□ 0.94
SPTLC1O15269 AL445675.2-201ENST00000620291 557 ntBASIC20.93■□□□□ 0.94
SPTLC1O15269 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.93■□□□□ 0.94
SPTLC1O15269 HLA-A-209ENST00000638375 975 ntBASIC20.93■□□□□ 0.94
SPTLC1O15269 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPTLC1O15269 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SPTLC1O15269 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.93■□□□□ 0.94
SPTLC1O15269 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.93■□□□□ 0.94
SPTLC1O15269 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SPTLC1O15269 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPTLC1O15269 KRT16P1-201ENST00000399124 1418 ntBASIC20.93■□□□□ 0.94
SPTLC1O15269 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPTLC1O15269 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC1O15269 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC1O15269 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SPTLC1O15269 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC1O15269 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.92■□□□□ 0.94
SPTLC1O15269 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC1O15269 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC1O15269 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC1O15269 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SPTLC1O15269 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SPTLC1O15269 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC1O15269 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.92■□□□□ 0.94
SPTLC1O15269 REXO1L10P-201ENST00000615707 1290 ntBASIC20.92■□□□□ 0.94
SPTLC1O15269 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC1O15269 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC1O15269 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC1O15269 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.92■□□□□ 0.94
SPTLC1O15269 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC1O15269 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC1O15269 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.92■□□□□ 0.94
SPTLC1O15269 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC1O15269 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SPTLC1O15269 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms