Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC27.35■■□□□ 1.97
CHD2O14647 AC140113.3-201ENST00000605663 199 ntBASIC27.35■■□□□ 1.97
CHD2O14647 AC004263.2-201ENST00000617183 678 ntBASIC27.35■■□□□ 1.97
CHD2O14647 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CHD2O14647 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CHD2O14647 ERF-202ENST00000440177 2032 ntTSL 2 BASIC27.35■■□□□ 1.97
CHD2O14647 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
CHD2O14647 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC27.34■■□□□ 1.97
CHD2O14647 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CHD2O14647 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
CHD2O14647 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC27.34■■□□□ 1.97
CHD2O14647 PRELID1P1-202ENST00000567272 903 ntBASIC27.34■■□□□ 1.97
CHD2O14647 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC27.34■■□□□ 1.97
CHD2O14647 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
CHD2O14647 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC27.34■■□□□ 1.97
CHD2O14647 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CHD2O14647 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CHD2O14647 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
CHD2O14647 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CHD2O14647 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC27.34■■□□□ 1.97
CHD2O14647 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
CHD2O14647 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
CHD2O14647 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC27.34■■□□□ 1.97
CHD2O14647 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC27.34■■□□□ 1.97
CHD2O14647 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CHD2O14647 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
CHD2O14647 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC27.33■■□□□ 1.97
CHD2O14647 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CHD2O14647 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC27.33■■□□□ 1.97
CHD2O14647 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CHD2O14647 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CHD2O14647 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC27.33■■□□□ 1.97
CHD2O14647 MIR3652-201ENST00000579335 131 ntBASIC27.33■■□□□ 1.97
CHD2O14647 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CHD2O14647 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC27.33■■□□□ 1.97
CHD2O14647 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CHD2O14647 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CHD2O14647 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC27.33■■□□□ 1.97
CHD2O14647 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CHD2O14647 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CHD2O14647 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC27.33■■□□□ 1.96
CHD2O14647 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC27.32■■□□□ 1.96
CHD2O14647 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CHD2O14647 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CHD2O14647 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CHD2O14647 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC27.32■■□□□ 1.96
CHD2O14647 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC27.32■■□□□ 1.96
CHD2O14647 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC27.32■■□□□ 1.96
CHD2O14647 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CHD2O14647 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC27.32■■□□□ 1.96
CHD2O14647 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CHD2O14647 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CHD2O14647 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CHD2O14647 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CHD2O14647 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CHD2O14647 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC27.32■■□□□ 1.96
CHD2O14647 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CHD2O14647 CD37-204ENST00000535669 1674 ntTSL 2 BASIC27.31■■□□□ 1.96
CHD2O14647 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC27.31■■□□□ 1.96
CHD2O14647 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CHD2O14647 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC27.31■■□□□ 1.96
CHD2O14647 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC27.31■■□□□ 1.96
CHD2O14647 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC27.31■■□□□ 1.96
CHD2O14647 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC27.31■■□□□ 1.96
CHD2O14647 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC27.31■■□□□ 1.96
CHD2O14647 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC27.31■■□□□ 1.96
CHD2O14647 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CHD2O14647 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CHD2O14647 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CHD2O14647 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC27.31■■□□□ 1.96
CHD2O14647 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CHD2O14647 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC27.31■■□□□ 1.96
CHD2O14647 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CHD2O14647 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC27.3■■□□□ 1.96
CHD2O14647 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
CHD2O14647 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC27.3■■□□□ 1.96
CHD2O14647 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CHD2O14647 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CHD2O14647 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CHD2O14647 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC27.3■■□□□ 1.96
CHD2O14647 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
CHD2O14647 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC27.3■■□□□ 1.96
CHD2O14647 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
CHD2O14647 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
CHD2O14647 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC27.3■■□□□ 1.96
CHD2O14647 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC27.3■■□□□ 1.96
CHD2O14647 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CHD2O14647 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC27.29■■□□□ 1.96
CHD2O14647 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC27.29■■□□□ 1.96
CHD2O14647 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CHD2O14647 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
CHD2O14647 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CHD2O14647 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CHD2O14647 AC004870.1-201ENST00000315132 882 ntBASIC27.29■■□□□ 1.96
CHD2O14647 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CHD2O14647 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CHD2O14647 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC27.29■■□□□ 1.96
CHD2O14647 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC27.29■■□□□ 1.96
CHD2O14647 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC27.29■■□□□ 1.96
CHD2O14647 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC27.29■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms