Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CHD1O14646 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
CHD1O14646 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CHD1O14646 RPP21-221ENST00000428040 594 ntTSL 2 BASIC31.85■■■□□ 2.69
CHD1O14646 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CHD1O14646 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC31.85■■■□□ 2.69
CHD1O14646 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC31.85■■■□□ 2.69
CHD1O14646 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC31.85■■■□□ 2.69
CHD1O14646 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
CHD1O14646 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CHD1O14646 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
CHD1O14646 KRT8P8-201ENST00000434750 1448 ntBASIC31.84■■■□□ 2.69
CHD1O14646 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CHD1O14646 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC31.84■■■□□ 2.69
CHD1O14646 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CHD1O14646 PENK-208ENST00000523051 772 ntTSL 5 BASIC31.84■■■□□ 2.69
CHD1O14646 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CHD1O14646 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC31.84■■■□□ 2.69
CHD1O14646 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
CHD1O14646 KRT8P41-201ENST00000533985 1514 ntBASIC31.84■■■□□ 2.69
CHD1O14646 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC31.84■■■□□ 2.69
CHD1O14646 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
CHD1O14646 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CHD1O14646 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC31.83■■■□□ 2.69
CHD1O14646 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC31.83■■■□□ 2.69
CHD1O14646 CIB2-208ENST00000560618 804 ntTSL 2 BASIC31.83■■■□□ 2.69
CHD1O14646 MPI-205ENST00000562606 1052 ntTSL 3 BASIC31.83■■■□□ 2.69
CHD1O14646 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CHD1O14646 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC31.83■■■□□ 2.69
CHD1O14646 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
CHD1O14646 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC31.83■■■□□ 2.69
CHD1O14646 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC31.83■■■□□ 2.69
CHD1O14646 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CHD1O14646 AC079776.4-201ENST00000511039 504 ntBASIC31.83■■■□□ 2.69
CHD1O14646 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC31.83■■■□□ 2.69
CHD1O14646 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC31.83■■■□□ 2.69
CHD1O14646 TMEM179-206ENST00000616017 1645 ntBASIC31.83■■■□□ 2.69
CHD1O14646 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC31.83■■■□□ 2.69
CHD1O14646 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CHD1O14646 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CHD1O14646 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CHD1O14646 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CHD1O14646 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CHD1O14646 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CHD1O14646 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CHD1O14646 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CHD1O14646 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CHD1O14646 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CHD1O14646 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC31.82■■■□□ 2.68
CHD1O14646 NME4-212ENST00000621774 904 ntTSL 3 BASIC31.82■■■□□ 2.68
CHD1O14646 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC31.82■■■□□ 2.68
CHD1O14646 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
CHD1O14646 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC31.82■■■□□ 2.68
CHD1O14646 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
CHD1O14646 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
CHD1O14646 BX640515.1-201ENST00000617215 977 ntBASIC31.81■■■□□ 2.68
CHD1O14646 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC31.81■■■□□ 2.68
CHD1O14646 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC31.81■■■□□ 2.68
CHD1O14646 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
CHD1O14646 PNN-202ENST00000553331 656 ntTSL 3 BASIC31.8■■■□□ 2.68
CHD1O14646 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC31.8■■■□□ 2.68
CHD1O14646 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
CHD1O14646 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CHD1O14646 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CHD1O14646 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CHD1O14646 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CHD1O14646 AL160286.2-201ENST00000567150 934 ntBASIC31.8■■■□□ 2.68
CHD1O14646 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC31.8■■■□□ 2.68
CHD1O14646 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CHD1O14646 CD37-204ENST00000535669 1674 ntTSL 2 BASIC31.79■■■□□ 2.68
CHD1O14646 AL121603.2-201ENST00000557373 2117 ntBASIC31.79■■■□□ 2.68
CHD1O14646 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CHD1O14646 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CHD1O14646 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CHD1O14646 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC31.79■■■□□ 2.68
CHD1O14646 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CHD1O14646 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC31.79■■■□□ 2.68
CHD1O14646 MIR4674-201ENST00000582457 87 ntBASIC31.79■■■□□ 2.68
CHD1O14646 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC31.79■■■□□ 2.68
CHD1O14646 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC31.79■■■□□ 2.68
CHD1O14646 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CHD1O14646 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CHD1O14646 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CHD1O14646 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
CHD1O14646 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CHD1O14646 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CHD1O14646 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
CHD1O14646 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC31.78■■■□□ 2.68
CHD1O14646 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CHD1O14646 AC117500.6-201ENST00000624871 588 ntBASIC31.78■■■□□ 2.68
CHD1O14646 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CHD1O14646 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CHD1O14646 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC31.78■■■□□ 2.68
CHD1O14646 MIR574-201ENST00000385209 96 ntBASIC31.78■■■□□ 2.68
CHD1O14646 RNA5SP419-201ENST00000515908 135 ntBASIC31.78■■■□□ 2.68
CHD1O14646 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CHD1O14646 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC31.77■■■□□ 2.68
CHD1O14646 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC31.77■■■□□ 2.68
CHD1O14646 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CHD1O14646 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms