Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C4orf47A7E2U8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
C4orf47A7E2U8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C4orf47A7E2U8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.16■□□□□ 0.66
C4orf47A7E2U8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
C4orf47A7E2U8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
C4orf47A7E2U8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C4orf47A7E2U8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C4orf47A7E2U8 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
C4orf47A7E2U8 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C4orf47A7E2U8 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.16■□□□□ 0.66
C4orf47A7E2U8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C4orf47A7E2U8 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
C4orf47A7E2U8 AC012313.10-201ENST00000623509 926 ntBASIC19.16■□□□□ 0.66
C4orf47A7E2U8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C4orf47A7E2U8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C4orf47A7E2U8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.16■□□□□ 0.66
C4orf47A7E2U8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
C4orf47A7E2U8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.16■□□□□ 0.66
C4orf47A7E2U8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C4orf47A7E2U8 AC092338.2-201ENST00000568827 1415 ntBASIC19.16■□□□□ 0.66
C4orf47A7E2U8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
C4orf47A7E2U8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
C4orf47A7E2U8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C4orf47A7E2U8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
C4orf47A7E2U8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
C4orf47A7E2U8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.15■□□□□ 0.66
C4orf47A7E2U8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
C4orf47A7E2U8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.15■□□□□ 0.66
C4orf47A7E2U8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
C4orf47A7E2U8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
C4orf47A7E2U8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C4orf47A7E2U8 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
C4orf47A7E2U8 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.15■□□□□ 0.66
C4orf47A7E2U8 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.15■□□□□ 0.66
C4orf47A7E2U8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
C4orf47A7E2U8 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
C4orf47A7E2U8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C4orf47A7E2U8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C4orf47A7E2U8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
C4orf47A7E2U8 AL023973.1-201ENST00000624619 620 ntBASIC19.15■□□□□ 0.66
C4orf47A7E2U8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C4orf47A7E2U8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
C4orf47A7E2U8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C4orf47A7E2U8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C4orf47A7E2U8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
C4orf47A7E2U8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
C4orf47A7E2U8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
C4orf47A7E2U8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.15■□□□□ 0.66
C4orf47A7E2U8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
C4orf47A7E2U8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
C4orf47A7E2U8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.14■□□□□ 0.66
C4orf47A7E2U8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
C4orf47A7E2U8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
C4orf47A7E2U8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.14■□□□□ 0.65
C4orf47A7E2U8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.14■□□□□ 0.65
C4orf47A7E2U8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.14■□□□□ 0.65
C4orf47A7E2U8 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
C4orf47A7E2U8 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.14■□□□□ 0.65
C4orf47A7E2U8 AL441883.1-201ENST00000566170 1045 ntBASIC19.14■□□□□ 0.65
C4orf47A7E2U8 AL512604.3-201ENST00000569583 964 ntBASIC19.14■□□□□ 0.65
C4orf47A7E2U8 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.14■□□□□ 0.65
C4orf47A7E2U8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
C4orf47A7E2U8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
C4orf47A7E2U8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
C4orf47A7E2U8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
C4orf47A7E2U8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
C4orf47A7E2U8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.14■□□□□ 0.65
C4orf47A7E2U8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
C4orf47A7E2U8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.13■□□□□ 0.65
C4orf47A7E2U8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
C4orf47A7E2U8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.13■□□□□ 0.65
C4orf47A7E2U8 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
C4orf47A7E2U8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
C4orf47A7E2U8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C4orf47A7E2U8 TSPY17P-201ENST00000450329 467 ntBASIC19.13■□□□□ 0.65
C4orf47A7E2U8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.13■□□□□ 0.65
C4orf47A7E2U8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.13■□□□□ 0.65
C4orf47A7E2U8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
C4orf47A7E2U8 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
C4orf47A7E2U8 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C4orf47A7E2U8 TFP1-202ENST00000475455 1573 ntBASIC19.13■□□□□ 0.65
C4orf47A7E2U8 AC116351.2-201ENST00000606540 1585 ntBASIC19.13■□□□□ 0.65
C4orf47A7E2U8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C4orf47A7E2U8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
C4orf47A7E2U8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.13■□□□□ 0.65
C4orf47A7E2U8 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.13■□□□□ 0.65
C4orf47A7E2U8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
C4orf47A7E2U8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
C4orf47A7E2U8 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C4orf47A7E2U8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
C4orf47A7E2U8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
C4orf47A7E2U8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C4orf47A7E2U8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
C4orf47A7E2U8 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
C4orf47A7E2U8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.12■□□□□ 0.65
C4orf47A7E2U8 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C4orf47A7E2U8 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
C4orf47A7E2U8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.12■□□□□ 0.65
C4orf47A7E2U8 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms