Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV21A0A0B4J279 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV21A0A0B4J279 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TRAV21A0A0B4J279 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC14.54□□□□□ -0.08
TRAV21A0A0B4J279 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV21A0A0B4J279 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV21A0A0B4J279 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV21A0A0B4J279 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV21A0A0B4J279 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV21A0A0B4J279 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV21A0A0B4J279 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV21A0A0B4J279 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV21A0A0B4J279 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV21A0A0B4J279 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV21A0A0B4J279 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TRAV21A0A0B4J279 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV21A0A0B4J279 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRAV21A0A0B4J279 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV21A0A0B4J279 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV21A0A0B4J279 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 CNN2P6-201ENST00000439038 900 ntBASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 PLD4-205ENST00000553861 667 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 DUX4L16-201ENST00000555130 1264 ntBASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 LINC01465-201ENST00000408887 1940 ntBASIC14.53□□□□□ -0.08
TRAV21A0A0B4J279 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.08
TRAV21A0A0B4J279 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV21A0A0B4J279 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV21A0A0B4J279 AC004408.2-201ENST00000623613 2777 ntBASIC14.52□□□□□ -0.08
TRAV21A0A0B4J279 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TRAV21A0A0B4J279 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
TRAV21A0A0B4J279 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV21A0A0B4J279 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV21A0A0B4J279 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.52□□□□□ -0.08
TRAV21A0A0B4J279 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAV21A0A0B4J279 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV21A0A0B4J279 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV21A0A0B4J279 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 CYP2T1P-201ENST00000432607 1285 ntBASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 C2orf69P4-201ENST00000565394 541 ntBASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 MIR6821-201ENST00000617625 74 ntBASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV21A0A0B4J279 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms