Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AC004911.1-201ENST00000416316 871 ntBASIC18.33■□□□□ 0.52
TRBV5-3A0A0A0MS03 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV5-3A0A0A0MS03 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.33■□□□□ 0.52
TRBV5-3A0A0A0MS03 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV5-3A0A0A0MS03 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV5-3A0A0A0MS03 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.33■□□□□ 0.52
TRBV5-3A0A0A0MS03 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.33■□□□□ 0.52
TRBV5-3A0A0A0MS03 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TRBV5-3A0A0A0MS03 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV5-3A0A0A0MS03 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.33■□□□□ 0.52
TRBV5-3A0A0A0MS03 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV5-3A0A0A0MS03 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV5-3A0A0A0MS03 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TRBV5-3A0A0A0MS03 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV5-3A0A0A0MS03 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV5-3A0A0A0MS03 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV5-3A0A0A0MS03 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.32■□□□□ 0.52
TRBV5-3A0A0A0MS03 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV5-3A0A0A0MS03 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.32■□□□□ 0.52
TRBV5-3A0A0A0MS03 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.32■□□□□ 0.52
TRBV5-3A0A0A0MS03 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TRBV5-3A0A0A0MS03 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV5-3A0A0A0MS03 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV5-3A0A0A0MS03 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TRBV5-3A0A0A0MS03 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.32■□□□□ 0.52
TRBV5-3A0A0A0MS03 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TRBV5-3A0A0A0MS03 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV5-3A0A0A0MS03 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 RARRES2P6-201ENST00000567333 442 ntBASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 AC005829.2-201ENST00000571422 1056 ntBASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 AL050303.2-201ENST00000619798 666 ntBASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.31■□□□□ 0.52
TRBV5-3A0A0A0MS03 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 AL162430.1-201ENST00000480705 870 ntBASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 FP475955.4-201ENST00000623131 1990 ntBASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 AC104417.2-201ENST00000562989 1793 ntBASIC18.3■□□□□ 0.52
TRBV5-3A0A0A0MS03 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV5-3A0A0A0MS03 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV5-3A0A0A0MS03 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TRBV5-3A0A0A0MS03 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV5-3A0A0A0MS03 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
TRBV5-3A0A0A0MS03 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV5-3A0A0A0MS03 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms