Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 MTND3P5-201ENST00000512798 333 ntBASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 AC138938.1-201ENST00000515431 782 ntBASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 GARSP1-201ENST00000570895 719 ntBASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 MIR4789-201ENST00000577469 82 ntBASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 MIR6748-201ENST00000610433 71 ntBASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 AC024257.5-201ENST00000612739 531 ntBASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 MIR7155-201ENST00000615925 56 ntBASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 AC007490.1-201ENST00000624321 703 ntBASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 OR5BE1P-202ENST00000641168 1176 ntBASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 HSPD1P11-201ENST00000508643 1702 ntBASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 AC068733.2-201ENST00000605434 1418 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 ZNF812P-201ENST00000457674 1694 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 SNORD56.4-201ENST00000363883 71 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 RNU4-4P-201ENST00000364588 130 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 U6.112-201ENST00000384129 70 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 RNU5A-2P-201ENST00000384337 116 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 Y_RNA.578-201ENST00000390903 88 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 RPS3AP26-201ENST00000398259 784 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 AL021407.1-201ENST00000404531 386 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 SETP15-201ENST00000412724 337 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 LINC01881-201ENST00000416103 412 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 AL034379.1-201ENST00000423216 253 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 MTND4P20-201ENST00000424125 869 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 RPF2P1-201ENST00000424137 906 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 AC092393.1-201ENST00000439625 742 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 CUBNP2-201ENST00000443534 1139 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 RPS27P5-201ENST00000444247 244 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 AL096803.2-201ENST00000450032 677 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 AL133477.1-201ENST00000457472 514 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 AC011225.1-201ENST00000457751 369 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 RN7SL184P-201ENST00000488308 297 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 NENFP3-201ENST00000503735 313 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 AC109481.1-201ENST00000509173 282 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 BX510359.5-201ENST00000515651 304 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 RPL12P22-201ENST00000519073 490 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 TPM3P3-201ENST00000521343 354 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 EIF4A2P5-201ENST00000529914 499 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 AC007494.1-201ENST00000562293 760 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 MTND4LP24-201ENST00000572277 291 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 AL590229.1-201ENST00000603497 542 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 AC009163.6-201ENST00000612367 342 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 AL392088.2-201ENST00000637607 285 ntBASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.68□□□□□ -1.34
PDLIM7Q9NR12 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PDLIM7Q9NR12 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
PDLIM7Q9NR12 OLMALINC-203ENST00000641087 3779 ntBASIC6.67□□□□□ -1.34
PDLIM7Q9NR12 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.67□□□□□ -1.34
PDLIM7Q9NR12 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PDLIM7Q9NR12 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.67□□□□□ -1.34
PDLIM7Q9NR12 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.67□□□□□ -1.34
PDLIM7Q9NR12 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.67□□□□□ -1.34
PDLIM7Q9NR12 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PDLIM7Q9NR12 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PDLIM7Q9NR12 RN7SKP124-201ENST00000364730 341 ntBASIC6.67□□□□□ -1.34
PDLIM7Q9NR12 RNU6-224P-201ENST00000384055 107 ntBASIC6.67□□□□□ -1.34
PDLIM7Q9NR12 RNU6-83P-201ENST00000384568 112 ntBASIC6.67□□□□□ -1.34
PDLIM7Q9NR12 MIR585-201ENST00000384887 94 ntBASIC6.67□□□□□ -1.34
PDLIM7Q9NR12 RN7SKP59-201ENST00000410520 314 ntBASIC6.67□□□□□ -1.34
PDLIM7Q9NR12 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.67□□□□□ -1.34
PDLIM7Q9NR12 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms