Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 SNORA70.9-201ENST00000384370 135 ntBASIC6.45□□□□□ -1.38
VTA1Q9NP79 AC009804.1-201ENST00000400949 179 ntBASIC6.45□□□□□ -1.38
VTA1Q9NP79 VPS26BP1-201ENST00000417155 755 ntBASIC6.45□□□□□ -1.38
VTA1Q9NP79 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.45□□□□□ -1.38
VTA1Q9NP79 MTND2P16-201ENST00000419987 799 ntBASIC6.45□□□□□ -1.38
VTA1Q9NP79 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
VTA1Q9NP79 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC6.45□□□□□ -1.38
VTA1Q9NP79 HSPE1P16-201ENST00000426640 348 ntBASIC6.45□□□□□ -1.38
VTA1Q9NP79 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.45□□□□□ -1.38
VTA1Q9NP79 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
VTA1Q9NP79 MTCO2P20-201ENST00000437339 673 ntBASIC6.45□□□□□ -1.38
VTA1Q9NP79 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.45□□□□□ -1.38
VTA1Q9NP79 SEPT14P24-201ENST00000447236 180 ntBASIC6.45□□□□□ -1.38
VTA1Q9NP79 OR7E116P-201ENST00000448529 957 ntBASIC6.45□□□□□ -1.38
VTA1Q9NP79 AC004129.2-201ENST00000457229 287 ntBASIC6.45□□□□□ -1.38
VTA1Q9NP79 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.45□□□□□ -1.38
VTA1Q9NP79 AC079080.1-201ENST00000479841 822 ntBASIC6.45□□□□□ -1.38
VTA1Q9NP79 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.45□□□□□ -1.38
VTA1Q9NP79 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VTA1Q9NP79 AC105384.2-201ENST00000508433 640 ntBASIC6.45□□□□□ -1.38
VTA1Q9NP79 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC6.45□□□□□ -1.38
VTA1Q9NP79 AC005351.1-201ENST00000511152 786 ntBASIC6.45□□□□□ -1.38
VTA1Q9NP79 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC6.45□□□□□ -1.38
VTA1Q9NP79 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC6.45□□□□□ -1.38
VTA1Q9NP79 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.45□□□□□ -1.38
VTA1Q9NP79 OR10V3P-201ENST00000525712 725 ntBASIC6.45□□□□□ -1.38
VTA1Q9NP79 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.45□□□□□ -1.38
VTA1Q9NP79 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.45□□□□□ -1.38
VTA1Q9NP79 AC023538.1-201ENST00000534576 736 ntBASIC6.45□□□□□ -1.38
VTA1Q9NP79 VBP1-203ENST00000535916 944 ntTSL 2 BASIC6.45□□□□□ -1.38
VTA1Q9NP79 MRPS21P7-201ENST00000566937 238 ntBASIC6.45□□□□□ -1.38
VTA1Q9NP79 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.45□□□□□ -1.38
VTA1Q9NP79 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC6.45□□□□□ -1.38
VTA1Q9NP79 SUGT1P3-202ENST00000604259 383 ntBASIC6.45□□□□□ -1.38
VTA1Q9NP79 OR2BH1P-201ENST00000608850 864 ntBASIC6.45□□□□□ -1.38
VTA1Q9NP79 AC016769.4-201ENST00000616893 535 ntBASIC6.45□□□□□ -1.38
VTA1Q9NP79 AC005840.5-201ENST00000619166 599 ntBASIC6.45□□□□□ -1.38
VTA1Q9NP79 MIR6837-201ENST00000620884 64 ntBASIC6.45□□□□□ -1.38
VTA1Q9NP79 AC009120.7-201ENST00000623452 780 ntBASIC6.45□□□□□ -1.38
VTA1Q9NP79 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.45□□□□□ -1.38
VTA1Q9NP79 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
VTA1Q9NP79 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VTA1Q9NP79 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
VTA1Q9NP79 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
VTA1Q9NP79 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VTA1Q9NP79 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
VTA1Q9NP79 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VTA1Q9NP79 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.45□□□□□ -1.38
VTA1Q9NP79 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
VTA1Q9NP79 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
VTA1Q9NP79 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VTA1Q9NP79 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
VTA1Q9NP79 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.44□□□□□ -1.38
VTA1Q9NP79 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.44□□□□□ -1.38
VTA1Q9NP79 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VTA1Q9NP79 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
VTA1Q9NP79 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.44□□□□□ -1.38
VTA1Q9NP79 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.44□□□□□ -1.38
VTA1Q9NP79 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
VTA1Q9NP79 MT-TP-201ENST00000387461 68 ntBASIC6.44□□□□□ -1.38
VTA1Q9NP79 RNU6-932P-201ENST00000391108 106 ntBASIC6.44□□□□□ -1.38
VTA1Q9NP79 ATP5HP3-201ENST00000396994 486 ntBASIC6.44□□□□□ -1.38
VTA1Q9NP79 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC6.44□□□□□ -1.38
VTA1Q9NP79 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.44□□□□□ -1.38
VTA1Q9NP79 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC6.44□□□□□ -1.38
VTA1Q9NP79 RPL12P28-201ENST00000430852 489 ntBASIC6.44□□□□□ -1.38
VTA1Q9NP79 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.44□□□□□ -1.38
VTA1Q9NP79 YWHAZP2-201ENST00000440317 728 ntBASIC6.44□□□□□ -1.38
VTA1Q9NP79 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC6.44□□□□□ -1.38
VTA1Q9NP79 UBA52P7-201ENST00000486088 380 ntBASIC6.44□□□□□ -1.38
VTA1Q9NP79 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VTA1Q9NP79 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VTA1Q9NP79 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC6.44□□□□□ -1.38
VTA1Q9NP79 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC6.44□□□□□ -1.38
VTA1Q9NP79 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.44□□□□□ -1.38
VTA1Q9NP79 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC6.44□□□□□ -1.38
VTA1Q9NP79 AC090424.1-201ENST00000535243 736 ntBASIC6.44□□□□□ -1.38
VTA1Q9NP79 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.44□□□□□ -1.38
VTA1Q9NP79 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
VTA1Q9NP79 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.44□□□□□ -1.38
VTA1Q9NP79 MIR4420-201ENST00000583944 77 ntBASIC6.44□□□□□ -1.38
VTA1Q9NP79 AC011374.2-201ENST00000607135 526 ntBASIC6.44□□□□□ -1.38
VTA1Q9NP79 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC6.44□□□□□ -1.38
VTA1Q9NP79 AC010435.1-201ENST00000623353 1177 ntBASIC6.44□□□□□ -1.38
VTA1Q9NP79 AC104985.3-201ENST00000623479 597 ntBASIC6.44□□□□□ -1.38
VTA1Q9NP79 MTND2P41-201ENST00000637599 773 ntBASIC6.44□□□□□ -1.38
VTA1Q9NP79 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VTA1Q9NP79 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
VTA1Q9NP79 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VTA1Q9NP79 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VTA1Q9NP79 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
VTA1Q9NP79 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.44□□□□□ -1.38
VTA1Q9NP79 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.44□□□□□ -1.38
VTA1Q9NP79 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
VTA1Q9NP79 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.44□□□□□ -1.38
VTA1Q9NP79 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VTA1Q9NP79 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.44□□□□□ -1.38
VTA1Q9NP79 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
VTA1Q9NP79 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.43□□□□□ -1.38
VTA1Q9NP79 PABPC1P6-201ENST00000445594 1829 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms