Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 SIAH1P1-201ENST00000479411 923 ntBASIC5.44□□□□□ -1.54
PCDH9Q9HC56 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDH9Q9HC56 RN7SL447P-201ENST00000494711 245 ntBASIC5.44□□□□□ -1.54
PCDH9Q9HC56 CAB39P1-201ENST00000502277 460 ntBASIC5.44□□□□□ -1.54
PCDH9Q9HC56 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.44□□□□□ -1.54
PCDH9Q9HC56 AC117525.1-201ENST00000515228 503 ntBASIC5.44□□□□□ -1.54
PCDH9Q9HC56 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.44□□□□□ -1.54
PCDH9Q9HC56 NPM1P52-201ENST00000518264 846 ntBASIC5.44□□□□□ -1.54
PCDH9Q9HC56 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDH9Q9HC56 AC134349.2-201ENST00000535136 910 ntBASIC5.44□□□□□ -1.54
PCDH9Q9HC56 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDH9Q9HC56 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDH9Q9HC56 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDH9Q9HC56 RBM22P1-201ENST00000578589 1214 ntBASIC5.44□□□□□ -1.54
PCDH9Q9HC56 BNIP3P35-201ENST00000604530 490 ntBASIC5.44□□□□□ -1.54
PCDH9Q9HC56 AC009597.2-201ENST00000604659 592 ntBASIC5.44□□□□□ -1.54
PCDH9Q9HC56 AL162431.4-201ENST00000604674 411 ntBASIC5.44□□□□□ -1.54
PCDH9Q9HC56 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDH9Q9HC56 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDH9Q9HC56 AC074276.2-201ENST00000619891 348 ntBASIC5.44□□□□□ -1.54
PCDH9Q9HC56 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDH9Q9HC56 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDH9Q9HC56 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDH9Q9HC56 AC093849.1-201ENST00000563631 2209 ntBASIC5.44□□□□□ -1.54
PCDH9Q9HC56 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDH9Q9HC56 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDH9Q9HC56 AL138820.1-201ENST00000617901 5305 ntBASIC5.44□□□□□ -1.54
PCDH9Q9HC56 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDH9Q9HC56 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDH9Q9HC56 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 DDX6P1-205ENST00000441966 1436 ntBASIC5.43□□□□□ -1.54
PCDH9Q9HC56 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 RN7SKP160-201ENST00000363804 340 ntBASIC5.43□□□□□ -1.54
PCDH9Q9HC56 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 RNA5SP487-201ENST00000410186 122 ntBASIC5.43□□□□□ -1.54
PCDH9Q9HC56 RN7SKP59-201ENST00000410520 314 ntBASIC5.43□□□□□ -1.54
PCDH9Q9HC56 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 SPRYD7P1-201ENST00000443861 570 ntBASIC5.43□□□□□ -1.54
PCDH9Q9HC56 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 AC016687.1-201ENST00000482574 353 ntBASIC5.43□□□□□ -1.54
PCDH9Q9HC56 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 RPL7L1P4-201ENST00000513004 707 ntBASIC5.43□□□□□ -1.54
PCDH9Q9HC56 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 BX510359.5-201ENST00000515651 304 ntBASIC5.43□□□□□ -1.54
PCDH9Q9HC56 HMGB1P40-201ENST00000525121 540 ntBASIC5.43□□□□□ -1.54
PCDH9Q9HC56 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 YWHABP2-201ENST00000540201 713 ntBASIC5.43□□□□□ -1.54
PCDH9Q9HC56 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 RN7SL708P-201ENST00000580952 299 ntBASIC5.43□□□□□ -1.54
PCDH9Q9HC56 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 AC005252.1-201ENST00000604518 1063 ntBASIC5.43□□□□□ -1.54
PCDH9Q9HC56 MIR6768-201ENST00000610734 72 ntBASIC5.43□□□□□ -1.54
PCDH9Q9HC56 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 AC010266.2-201ENST00000564741 3255 ntBASIC5.43□□□□□ -1.54
PCDH9Q9HC56 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.43□□□□□ -1.54
PCDH9Q9HC56 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH9Q9HC56 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PCDH9Q9HC56 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDH9Q9HC56 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDH9Q9HC56 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDH9Q9HC56 RNA5SP223-201ENST00000365174 120 ntBASIC5.42□□□□□ -1.54
PCDH9Q9HC56 RNU6-1176P-201ENST00000390955 107 ntBASIC5.42□□□□□ -1.54
PCDH9Q9HC56 CCNB2P1-201ENST00000399411 1150 ntBASIC5.42□□□□□ -1.54
PCDH9Q9HC56 AL356057.1-202ENST00000402263 756 ntBASIC5.42□□□□□ -1.54
PCDH9Q9HC56 RNU2-22P-201ENST00000411266 212 ntBASIC5.42□□□□□ -1.54
PCDH9Q9HC56 AL390774.1-201ENST00000411924 246 ntBASIC5.42□□□□□ -1.54
PCDH9Q9HC56 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDH9Q9HC56 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDH9Q9HC56 GTF3AP1-201ENST00000416942 1004 ntBASIC5.42□□□□□ -1.54
PCDH9Q9HC56 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDH9Q9HC56 AL133325.1-201ENST00000421090 382 ntBASIC5.42□□□□□ -1.54
PCDH9Q9HC56 AC079355.1-201ENST00000421770 223 ntBASIC5.42□□□□□ -1.54
PCDH9Q9HC56 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDH9Q9HC56 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDH9Q9HC56 UBE2V1P6-201ENST00000430840 422 ntBASIC5.42□□□□□ -1.54
PCDH9Q9HC56 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PCDH9Q9HC56 CYCSP24-201ENST00000445119 316 ntBASIC5.42□□□□□ -1.54
PCDH9Q9HC56 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms