Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.09□□□□□ -1.43
UPF2Q9HAU5 AL390334.1-201ENST00000556395 450 ntBASIC6.09□□□□□ -1.43
UPF2Q9HAU5 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.09□□□□□ -1.43
UPF2Q9HAU5 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.09□□□□□ -1.43
UPF2Q9HAU5 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.09□□□□□ -1.43
UPF2Q9HAU5 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.09□□□□□ -1.43
UPF2Q9HAU5 AC100767.2-201ENST00000604840 693 ntBASIC6.09□□□□□ -1.43
UPF2Q9HAU5 AC087783.2-201ENST00000605070 562 ntBASIC6.09□□□□□ -1.43
UPF2Q9HAU5 RPSAP73-201ENST00000614820 330 ntBASIC6.09□□□□□ -1.43
UPF2Q9HAU5 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.09□□□□□ -1.43
UPF2Q9HAU5 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.09□□□□□ -1.43
UPF2Q9HAU5 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.09□□□□□ -1.43
UPF2Q9HAU5 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.09□□□□□ -1.43
UPF2Q9HAU5 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.09□□□□□ -1.43
UPF2Q9HAU5 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
UPF2Q9HAU5 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.09□□□□□ -1.43
UPF2Q9HAU5 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
UPF2Q9HAU5 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
UPF2Q9HAU5 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
UPF2Q9HAU5 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.44
UPF2Q9HAU5 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
UPF2Q9HAU5 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
UPF2Q9HAU5 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.09□□□□□ -1.44
UPF2Q9HAU5 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.08□□□□□ -1.44
UPF2Q9HAU5 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
UPF2Q9HAU5 SNORA67-201ENST00000384423 137 ntBASIC6.08□□□□□ -1.44
UPF2Q9HAU5 AL592291.1-201ENST00000403830 352 ntBASIC6.08□□□□□ -1.44
UPF2Q9HAU5 GLS-204ENST00000409428 816 ntTSL 2 BASIC6.08□□□□□ -1.44
UPF2Q9HAU5 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC6.08□□□□□ -1.44
UPF2Q9HAU5 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC6.08□□□□□ -1.44
UPF2Q9HAU5 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC6.08□□□□□ -1.44
UPF2Q9HAU5 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC6.08□□□□□ -1.44
UPF2Q9HAU5 CYCSP6-201ENST00000434498 302 ntBASIC6.08□□□□□ -1.44
UPF2Q9HAU5 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.08□□□□□ -1.44
UPF2Q9HAU5 RPS26P2-201ENST00000440331 348 ntBASIC6.08□□□□□ -1.44
UPF2Q9HAU5 RPS29P9-201ENST00000440360 171 ntBASIC6.08□□□□□ -1.44
UPF2Q9HAU5 AC064862.4-201ENST00000442180 334 ntBASIC6.08□□□□□ -1.44
UPF2Q9HAU5 HMGN1P2-201ENST00000445197 310 ntBASIC6.08□□□□□ -1.44
UPF2Q9HAU5 OR52E7P-201ENST00000452394 933 ntBASIC6.08□□□□□ -1.44
UPF2Q9HAU5 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC6.08□□□□□ -1.44
UPF2Q9HAU5 RN7SL517P-201ENST00000462240 305 ntBASIC6.08□□□□□ -1.44
UPF2Q9HAU5 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC6.08□□□□□ -1.44
UPF2Q9HAU5 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
UPF2Q9HAU5 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
UPF2Q9HAU5 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
UPF2Q9HAU5 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.08□□□□□ -1.44
UPF2Q9HAU5 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.08□□□□□ -1.44
UPF2Q9HAU5 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.08□□□□□ -1.44
UPF2Q9HAU5 AL691477.1-201ENST00000624398 162 ntBASIC6.08□□□□□ -1.44
UPF2Q9HAU5 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.08□□□□□ -1.44
UPF2Q9HAU5 AL034370.1-201ENST00000397254 1590 ntBASIC6.08□□□□□ -1.44
UPF2Q9HAU5 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC6.08□□□□□ -1.44
UPF2Q9HAU5 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
UPF2Q9HAU5 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.08□□□□□ -1.44
UPF2Q9HAU5 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
UPF2Q9HAU5 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.08□□□□□ -1.44
UPF2Q9HAU5 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 AC235565.1-201ENST00000456962 1325 ntBASIC6.07□□□□□ -1.44
UPF2Q9HAU5 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 MAPK10-303ENST00000641324 3959 ntBASIC6.07□□□□□ -1.44
UPF2Q9HAU5 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 AC091305.2-201ENST00000624049 1576 ntBASIC6.07□□□□□ -1.44
UPF2Q9HAU5 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 LYPLA1P3-201ENST00000402650 695 ntBASIC6.07□□□□□ -1.44
UPF2Q9HAU5 AL512422.1-201ENST00000407033 553 ntBASIC6.07□□□□□ -1.44
UPF2Q9HAU5 AL390774.1-201ENST00000411924 246 ntBASIC6.07□□□□□ -1.44
UPF2Q9HAU5 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 RPL36AP39-201ENST00000445859 318 ntBASIC6.07□□□□□ -1.44
UPF2Q9HAU5 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 RPL35AP19-201ENST00000469425 329 ntBASIC6.07□□□□□ -1.44
UPF2Q9HAU5 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 UGT2A3P7-201ENST00000510485 734 ntBASIC6.07□□□□□ -1.44
UPF2Q9HAU5 Y_RNA.719-201ENST00000517156 106 ntBASIC6.07□□□□□ -1.44
UPF2Q9HAU5 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
UPF2Q9HAU5 AC097461.1-201ENST00000568928 2821 ntBASIC6.07□□□□□ -1.44
UPF2Q9HAU5 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
UPF2Q9HAU5 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms