Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 LINC00328-2P-201ENST00000436585 219 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 ARMC4P1-201ENST00000438905 707 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AC245291.3-201ENST00000443400 292 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AL137845.2-201ENST00000444292 988 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 RHEBP2-201ENST00000450289 600 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 HMGB1P5-202ENST00000451497 985 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AL359385.1-201ENST00000456509 365 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 RN7SL393P-201ENST00000463588 296 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 RN7SL413P-201ENST00000482700 297 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 NCOR1P1-202ENST00000486162 291 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AC112198.1-201ENST00000505369 1220 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AC109464.2-201ENST00000510242 943 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 HMGB3P13-201ENST00000511263 607 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 Vault.2-201ENST00000516519 98 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AC013701.1-201ENST00000522657 465 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AP001000.1-201ENST00000526843 742 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AP000619.3-201ENST00000535634 1127 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 ABBA01006766.1-201ENST00000584728 294 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 MIR4719-201ENST00000585233 84 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AC090181.2-201ENST00000602975 672 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AC012368.3-201ENST00000604190 219 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AC009237.12-201ENST00000604755 742 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AL645933.2-201ENST00000606743 1207 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 Z99129.1-201ENST00000612510 255 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 MIR6889-201ENST00000613185 59 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 TCL6_3.1-201ENST00000619064 137 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AP000776.1-201ENST00000530032 1663 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 Z95114.1-201ENST00000624264 14574 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AC007342.7-201ENST00000624610 2337 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 MTCO1P18-201ENST00000455518 1419 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 TTC39DP-201ENST00000416781 1688 ntBASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 IL6STP1-201ENST00000346911 1020 ntBASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 AL672167.1-206ENST00000356293 943 ntBASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 RNU1-84P-201ENST00000365447 164 ntBASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 AL391419.1-201ENST00000398901 1275 ntBASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 CHMP1B2P-201ENST00000399581 597 ntBASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 RPL7P8-201ENST00000411964 730 ntBASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 AC010385.1-201ENST00000412374 256 ntBASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 CDK8P2-201ENST00000415020 547 ntBASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 NENFP1-201ENST00000419476 466 ntBASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 IPPKP1-201ENST00000422501 768 ntBASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 AL139421.1-201ENST00000423010 169 ntBASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 AL020997.1-201ENST00000446554 349 ntBASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 KATNBL1P6-201ENST00000453433 915 ntBASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 RPS20P4-201ENST00000461659 355 ntBASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 GAPDHP36-201ENST00000480688 918 ntBASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 PPP1R11P1-201ENST00000486095 376 ntBASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 RPL29P23-201ENST00000486188 442 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms