Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 NCLP2-201ENST00000416078 1462 ntBASIC7.52□□□□□ -1.21
SCAPERQ9BY12 AL359955.1-201ENST00000455242 3275 ntBASIC7.52□□□□□ -1.21
SCAPERQ9BY12 RNA5SP388-201ENST00000362584 119 ntBASIC7.52□□□□□ -1.21
SCAPERQ9BY12 RNA5SP447-201ENST00000363749 119 ntBASIC7.52□□□□□ -1.21
SCAPERQ9BY12 AC023141.6-201ENST00000429418 337 ntBASIC7.52□□□□□ -1.21
SCAPERQ9BY12 AC116562.1-201ENST00000485355 781 ntBASIC7.52□□□□□ -1.21
SCAPERQ9BY12 AC090058.1-201ENST00000498788 435 ntBASIC7.52□□□□□ -1.21
SCAPERQ9BY12 AC068831.4-201ENST00000556118 109 ntBASIC7.52□□□□□ -1.21
SCAPERQ9BY12 AC021483.2-201ENST00000567415 758 ntBASIC7.52□□□□□ -1.21
SCAPERQ9BY12 IGKV1OR2-9-201ENST00000603957 287 ntBASIC7.52□□□□□ -1.21
SCAPERQ9BY12 IGKV1OR2-11-201ENST00000604120 287 ntBASIC7.52□□□□□ -1.21
SCAPERQ9BY12 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC7.52□□□□□ -1.21
SCAPERQ9BY12 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7.52□□□□□ -1.21
SCAPERQ9BY12 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SCAPERQ9BY12 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
SCAPERQ9BY12 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
SCAPERQ9BY12 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
SCAPERQ9BY12 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SCAPERQ9BY12 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
SCAPERQ9BY12 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
SCAPERQ9BY12 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SCAPERQ9BY12 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SCAPERQ9BY12 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC7.51□□□□□ -1.21
SCAPERQ9BY12 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SCAPERQ9BY12 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SCAPERQ9BY12 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC7.51□□□□□ -1.21
SCAPERQ9BY12 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SCAPERQ9BY12 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.51□□□□□ -1.21
SCAPERQ9BY12 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.51□□□□□ -1.21
SCAPERQ9BY12 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
SCAPERQ9BY12 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.51□□□□□ -1.21
SCAPERQ9BY12 SNORA57.1-201ENST00000391227 145 ntBASIC7.51□□□□□ -1.21
SCAPERQ9BY12 NPM1P33-201ENST00000438918 872 ntBASIC7.51□□□□□ -1.21
SCAPERQ9BY12 AC122718.1-201ENST00000439448 744 ntBASIC7.51□□□□□ -1.21
SCAPERQ9BY12 ARL2BPP10-201ENST00000446487 531 ntBASIC7.51□□□□□ -1.21
SCAPERQ9BY12 FAM133DP-201ENST00000464802 691 ntBASIC7.51□□□□□ -1.21
SCAPERQ9BY12 RN7SL817P-201ENST00000480777 288 ntBASIC7.51□□□□□ -1.21
SCAPERQ9BY12 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC7.51□□□□□ -1.21
SCAPERQ9BY12 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC7.51□□□□□ -1.21
SCAPERQ9BY12 IGHVIII-2-1-201ENST00000518843 291 ntBASIC7.51□□□□□ -1.21
SCAPERQ9BY12 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC7.51□□□□□ -1.21
SCAPERQ9BY12 AL109766.1-201ENST00000555080 552 ntBASIC7.51□□□□□ -1.21
SCAPERQ9BY12 AC000095.2-202ENST00000637415 154 ntBASIC7.51□□□□□ -1.21
SCAPERQ9BY12 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SCAPERQ9BY12 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC7.51□□□□□ -1.21
SCAPERQ9BY12 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC7.5□□□□□ -1.21
SCAPERQ9BY12 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SCAPERQ9BY12 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC7.5□□□□□ -1.21
SCAPERQ9BY12 MFSD8-220ENST00000641243 1422 ntBASIC7.5□□□□□ -1.21
SCAPERQ9BY12 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SCAPERQ9BY12 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SCAPERQ9BY12 SAMM50P1-201ENST00000455403 1399 ntBASIC7.5□□□□□ -1.21
SCAPERQ9BY12 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SCAPERQ9BY12 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
SCAPERQ9BY12 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SCAPERQ9BY12 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC7.5□□□□□ -1.21
SCAPERQ9BY12 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SCAPERQ9BY12 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SCAPERQ9BY12 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC7.5□□□□□ -1.21
SCAPERQ9BY12 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
SCAPERQ9BY12 AC099670.2-201ENST00000435130 321 ntBASIC7.5□□□□□ -1.21
SCAPERQ9BY12 RPS12P31-201ENST00000491419 398 ntBASIC7.5□□□□□ -1.21
SCAPERQ9BY12 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC7.5□□□□□ -1.21
SCAPERQ9BY12 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
SCAPERQ9BY12 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC7.5□□□□□ -1.21
SCAPERQ9BY12 MIR6716-201ENST00000613413 80 ntBASIC7.5□□□□□ -1.21
SCAPERQ9BY12 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SCAPERQ9BY12 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SCAPERQ9BY12 NLN-202ENST00000502464 8354 ntTSL 5 BASIC7.5□□□□□ -1.21
SCAPERQ9BY12 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
SCAPERQ9BY12 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC7.5□□□□□ -1.21
SCAPERQ9BY12 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
SCAPERQ9BY12 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SCAPERQ9BY12 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SCAPERQ9BY12 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SCAPERQ9BY12 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SCAPERQ9BY12 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
SCAPERQ9BY12 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SCAPERQ9BY12 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SCAPERQ9BY12 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SCAPERQ9BY12 AC092681.1-201ENST00000297369 291 ntBASIC7.49□□□□□ -1.21
SCAPERQ9BY12 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SCAPERQ9BY12 SNORA70.10-201ENST00000384515 134 ntBASIC7.49□□□□□ -1.21
SCAPERQ9BY12 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SCAPERQ9BY12 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC7.49□□□□□ -1.21
SCAPERQ9BY12 GAPDHP49-201ENST00000421421 961 ntBASIC7.49□□□□□ -1.21
SCAPERQ9BY12 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC7.49□□□□□ -1.21
SCAPERQ9BY12 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC7.49□□□□□ -1.21
SCAPERQ9BY12 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC7.49□□□□□ -1.21
SCAPERQ9BY12 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
SCAPERQ9BY12 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC7.49□□□□□ -1.21
SCAPERQ9BY12 RNU2-30P-201ENST00000516209 141 ntBASIC7.49□□□□□ -1.21
SCAPERQ9BY12 RNA5SP464-201ENST00000516251 108 ntBASIC7.49□□□□□ -1.21
SCAPERQ9BY12 AC100784.1-201ENST00000522790 310 ntBASIC7.49□□□□□ -1.21
SCAPERQ9BY12 AC084824.1-201ENST00000550917 1005 ntBASIC7.49□□□□□ -1.21
SCAPERQ9BY12 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC7.49□□□□□ -1.21
SCAPERQ9BY12 MIR6839-201ENST00000620425 113 ntBASIC7.49□□□□□ -1.21
SCAPERQ9BY12 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC7.49□□□□□ -1.21
SCAPERQ9BY12 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
SCAPERQ9BY12 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms