Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 ASB8-202ENST00000535055 657 ntTSL 2 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 MIR4307-201ENST00000582802 84 ntBASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AC020914.6-201ENST00000594327 272 ntBASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 TAS2R6P-201ENST00000605022 826 ntBASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 RNU6-88P-201ENST00000606801 100 ntBASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AL008726.1-201ENST00000607703 569 ntTSL 4 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AC068831.8-201ENST00000620171 435 ntBASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 U4.1-201ENST00000620349 87 ntBASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 KAT6A-208ENST00000485568 3592 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AC069222.1-201ENST00000608028 3360 ntBASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 BRDT-204ENST00000394530 3207 ntTSL 2 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AL391095.1-201ENST00000422519 2004 ntTSL 2 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 FTO-222ENST00000637969 2889 ntTSL 5 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 DAZ2-207ENST00000382449 3791 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 PPP2R3A-205ENST00000490467 1782 ntTSL 2 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 CARF-201ENST00000320443 5209 ntTSL 2 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 LINC01568-201ENST00000554640 2544 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 GBP7-201ENST00000294671 2454 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 UACA-203ENST00000539319 4026 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 LINC01721-201ENST00000457274 2376 ntTSL 2 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 LINC00622-201ENST00000562811 1570 ntBASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 TMPRSS11D-201ENST00000283916 2817 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 STAT4-201ENST00000358470 2769 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 ANKRD42-202ENST00000393389 4066 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 USP3-201ENST00000268049 5311 ntTSL 5 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AC109780.1-201ENST00000451768 1344 ntBASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 DCAF13P3-201ENST00000561147 1334 ntBASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AC109315.1-201ENST00000584143 1347 ntBASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AC067945.1-201ENST00000342609 618 ntBASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 U3.18-201ENST00000390880 216 ntBASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 GSTA12P-201ENST00000402398 508 ntBASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 COX6A1P3-201ENST00000404167 293 ntBASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 RNU4-34P-201ENST00000410431 124 ntBASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 OR9R1P-201ENST00000412200 877 ntBASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AP002453.1-201ENST00000492327 668 ntBASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AC012170.1-201ENST00000495139 359 ntBASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AC021220.1-201ENST00000507445 630 ntBASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 IGKV3D-25-201ENST00000519599 235 ntBASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AC109635.6-201ENST00000525487 1113 ntBASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 OR10G5P-201ENST00000532733 358 ntBASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms