Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC016550.1-201ENST00000505348 785 ntBASIC5.29□□□□□ -1.56
PKP4Q99569 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.29□□□□□ -1.56
PKP4Q99569 AC110760.3-202ENST00000515177 371 ntBASIC5.29□□□□□ -1.56
PKP4Q99569 SCARNA16.4-201ENST00000516956 187 ntBASIC5.29□□□□□ -1.56
PKP4Q99569 SCARNA20.4-201ENST00000516969 131 ntBASIC5.29□□□□□ -1.56
PKP4Q99569 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.29□□□□□ -1.56
PKP4Q99569 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC5.29□□□□□ -1.56
PKP4Q99569 AC084759.1-201ENST00000561168 290 ntBASIC5.29□□□□□ -1.56
PKP4Q99569 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.29□□□□□ -1.56
PKP4Q99569 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
PKP4Q99569 AC040174.2-201ENST00000602701 465 ntBASIC5.29□□□□□ -1.56
PKP4Q99569 AC034236.3-201ENST00000605999 461 ntBASIC5.29□□□□□ -1.56
PKP4Q99569 AC000068.2-201ENST00000608816 460 ntBASIC5.29□□□□□ -1.56
PKP4Q99569 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.29□□□□□ -1.56
PKP4Q99569 AC016597.2-201ENST00000613256 341 ntBASIC5.29□□□□□ -1.56
PKP4Q99569 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.29□□□□□ -1.56
PKP4Q99569 AC009032.1-201ENST00000617574 431 ntBASIC5.29□□□□□ -1.56
PKP4Q99569 uc_338.7-201ENST00000621834 124 ntBASIC5.29□□□□□ -1.56
PKP4Q99569 AC021106.3-201ENST00000623925 531 ntBASIC5.29□□□□□ -1.56
PKP4Q99569 AC010872.1-201ENST00000624225 675 ntBASIC5.29□□□□□ -1.56
PKP4Q99569 AC097520.1-201ENST00000624435 385 ntBASIC5.29□□□□□ -1.56
PKP4Q99569 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.29□□□□□ -1.56
PKP4Q99569 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PKP4Q99569 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.29□□□□□ -1.56
PKP4Q99569 AC100757.1-201ENST00000616872 1835 ntBASIC5.29□□□□□ -1.56
PKP4Q99569 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PKP4Q99569 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.29□□□□□ -1.56
PKP4Q99569 TRIM51GP-201ENST00000534741 1350 ntBASIC5.29□□□□□ -1.56
PKP4Q99569 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.28□□□□□ -1.56
PKP4Q99569 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
PKP4Q99569 AP001002.1-201ENST00000625148 1513 ntBASIC5.28□□□□□ -1.56
PKP4Q99569 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PKP4Q99569 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PKP4Q99569 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.28□□□□□ -1.56
PKP4Q99569 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PKP4Q99569 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
PKP4Q99569 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PKP4Q99569 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
PKP4Q99569 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PKP4Q99569 MIR7-1-201ENST00000384871 110 ntBASIC5.28□□□□□ -1.56
PKP4Q99569 AL357078.2-201ENST00000416486 427 ntBASIC5.28□□□□□ -1.56
PKP4Q99569 SRSF1P1-201ENST00000424058 520 ntBASIC5.28□□□□□ -1.56
PKP4Q99569 AC009784.1-201ENST00000426484 460 ntBASIC5.28□□□□□ -1.56
PKP4Q99569 MTATP6P17-201ENST00000431030 672 ntBASIC5.28□□□□□ -1.56
PKP4Q99569 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.28□□□□□ -1.56
PKP4Q99569 AL645638.1-201ENST00000440519 361 ntBASIC5.28□□□□□ -1.56
PKP4Q99569 AL391987.1-201ENST00000441025 200 ntBASIC5.28□□□□□ -1.56
PKP4Q99569 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.28□□□□□ -1.56
PKP4Q99569 CALM1P2-201ENST00000452941 448 ntBASIC5.28□□□□□ -1.56
PKP4Q99569 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.28□□□□□ -1.56
PKP4Q99569 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PKP4Q99569 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.28□□□□□ -1.56
PKP4Q99569 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.28□□□□□ -1.56
PKP4Q99569 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.28□□□□□ -1.56
PKP4Q99569 SEPT10P1-201ENST00000517342 1162 ntBASIC5.28□□□□□ -1.56
PKP4Q99569 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.28□□□□□ -1.56
PKP4Q99569 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.28□□□□□ -1.56
PKP4Q99569 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.28□□□□□ -1.56
PKP4Q99569 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.28□□□□□ -1.56
PKP4Q99569 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.28□□□□□ -1.56
PKP4Q99569 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.28□□□□□ -1.56
PKP4Q99569 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.28□□□□□ -1.56
PKP4Q99569 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PKP4Q99569 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PKP4Q99569 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.28□□□□□ -1.56
PKP4Q99569 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PKP4Q99569 BNIP3P31-201ENST00000604515 566 ntBASIC5.28□□□□□ -1.56
PKP4Q99569 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.28□□□□□ -1.56
PKP4Q99569 AC018754.1-201ENST00000607486 925 ntBASIC5.28□□□□□ -1.56
PKP4Q99569 AC018645.2-201ENST00000609151 472 ntBASIC5.28□□□□□ -1.56
PKP4Q99569 AL356274.1-201ENST00000617064 410 ntBASIC5.28□□□□□ -1.56
PKP4Q99569 AL121890.2-201ENST00000617644 465 ntBASIC5.28□□□□□ -1.56
PKP4Q99569 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.28□□□□□ -1.56
PKP4Q99569 AC091046.2-201ENST00000620775 665 ntBASIC5.28□□□□□ -1.56
PKP4Q99569 AC092159.4-201ENST00000624944 550 ntBASIC5.28□□□□□ -1.56
PKP4Q99569 AC097372.4-201ENST00000625025 466 ntBASIC5.28□□□□□ -1.56
PKP4Q99569 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PKP4Q99569 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PKP4Q99569 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PKP4Q99569 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PKP4Q99569 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.28□□□□□ -1.56
PKP4Q99569 HSPA8P17-201ENST00000427029 1382 ntBASIC5.28□□□□□ -1.56
PKP4Q99569 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
PKP4Q99569 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PKP4Q99569 HSPA8P19-201ENST00000505359 1517 ntBASIC5.28□□□□□ -1.56
PKP4Q99569 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.28□□□□□ -1.56
PKP4Q99569 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.28□□□□□ -1.56
PKP4Q99569 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.27□□□□□ -1.57
PKP4Q99569 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.27□□□□□ -1.57
PKP4Q99569 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PKP4Q99569 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PKP4Q99569 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PKP4Q99569 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
PKP4Q99569 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.27□□□□□ -1.57
PKP4Q99569 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PKP4Q99569 MIR323A-201ENST00000362199 86 ntBASIC5.27□□□□□ -1.57
PKP4Q99569 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PKP4Q99569 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.27□□□□□ -1.57
PKP4Q99569 MIR323B-201ENST00000385269 82 ntBASIC5.27□□□□□ -1.57
PKP4Q99569 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms