Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 AL121835.1-201ENST00000404250 354 ntBASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 RNU4-22P-201ENST00000411058 166 ntBASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 AL354890.1-201ENST00000413730 346 ntBASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 AC004022.2-201ENST00000413824 193 ntBASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 AL133325.1-201ENST00000421090 382 ntBASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 AL389925.1-201ENST00000432257 728 ntBASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 AC013410.1-201ENST00000436223 1232 ntBASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 AL445687.2-201ENST00000458156 728 ntBASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 NXT1P1-201ENST00000458481 316 ntBASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 AL603882.1-201ENST00000463059 681 ntBASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 MTND3P7-201ENST00000474435 343 ntBASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 AC010374.1-201ENST00000503762 1237 ntBASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 AC010460.1-201ENST00000507087 466 ntBASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 SNORA3.4-201ENST00000515969 96 ntBASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 AC103833.1-201ENST00000517442 172 ntBASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 IGKV2-19-201ENST00000518132 283 ntBASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 AP000926.4-201ENST00000527351 454 ntBASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 MTND4P33-201ENST00000556706 766 ntBASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 TXNP4-201ENST00000575018 310 ntBASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 AC008521.2-201ENST00000591021 259 ntBASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 HIRAP1-201ENST00000605318 787 ntBASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 AC013468.1-201ENST00000608680 598 ntBASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 AL355974.3-201ENST00000617383 467 ntBASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 AC092159.4-201ENST00000624944 550 ntBASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 AC019226.1-201ENST00000625666 515 ntBASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.15□□□□□ -1.42
CDK5RAP1Q96SZ6 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.15□□□□□ -1.43
CDK5RAP1Q96SZ6 SLC10A5P1-201ENST00000379063 1306 ntBASIC6.15□□□□□ -1.43
CDK5RAP1Q96SZ6 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDK5RAP1Q96SZ6 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.15□□□□□ -1.43
CDK5RAP1Q96SZ6 MTND5P29-201ENST00000458676 1807 ntBASIC6.15□□□□□ -1.43
CDK5RAP1Q96SZ6 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
CDK5RAP1Q96SZ6 NEPNP-201ENST00000404786 1371 ntBASIC6.15□□□□□ -1.43
CDK5RAP1Q96SZ6 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDK5RAP1Q96SZ6 AL034546.1-201ENST00000623740 3693 ntBASIC6.15□□□□□ -1.43
CDK5RAP1Q96SZ6 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.43
CDK5RAP1Q96SZ6 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CDK5RAP1Q96SZ6 AC092104.1-201ENST00000497346 1441 ntBASIC6.15□□□□□ -1.43
CDK5RAP1Q96SZ6 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CDK5RAP1Q96SZ6 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
CDK5RAP1Q96SZ6 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDK5RAP1Q96SZ6 AL592429.1-201ENST00000403909 1473 ntBASIC6.15□□□□□ -1.43
CDK5RAP1Q96SZ6 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC6.15□□□□□ -1.43
CDK5RAP1Q96SZ6 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.15□□□□□ -1.43
CDK5RAP1Q96SZ6 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AC015689.2-201ENST00000528172 1738 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AC015799.1-201ENST00000622996 3122 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 SNORD115-48-201ENST00000364764 76 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 RNU6-354P-201ENST00000383862 107 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 RNU6-610P-201ENST00000384264 107 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 GSTA8P-201ENST00000404253 637 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 RNU4-72P-201ENST00000410754 173 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 NIFKP3-201ENST00000417799 865 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 EEF1B2P5-201ENST00000444820 548 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AL358794.1-201ENST00000445689 381 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 REG1CP-206ENST00000447469 496 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 PTGES3P5-201ENST00000455109 434 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 RNU1-88P-201ENST00000459274 128 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 RPS12P31-201ENST00000491419 398 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 PSMA2P2-201ENST00000504319 686 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms