Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 OR2AO1P-201ENST00000476497 403 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 BGLT3-201ENST00000564523 994 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 RN7SL339P-201ENST00000580597 296 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 DUXAP11-201ENST00000603858 526 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AL021997.1-201ENST00000605757 193 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC098614.4-201ENST00000607601 462 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 MIR6075-201ENST00000620782 95 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AL022578.1-201ENST00000439330 1433 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 OTOG-202ENST00000399391 8778 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 RBBP6-201ENST00000319715 6229 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC006504.1-201ENST00000562493 3666 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 LRRC37A6P-202ENST00000448648 5444 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 MYOM1-203ENST00000400569 4927 ntTSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 SLC38A2-201ENST00000256689 4888 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 GUCY1B2-204ENST00000531898 1979 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 COL25A1-208ENST00000610288 4799 ntTSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 CASC19-261ENST00000641853 1638 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 CACNA1C-210ENST00000399606 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 ARMCX5-206ENST00000604957 4640 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 Y_RNA.272-201ENST00000364696 102 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 RNU6-813P-201ENST00000384691 107 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 DUTP5-201ENST00000406790 469 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 CYCSP17-201ENST00000407870 315 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 MTND4P22-201ENST00000413116 1169 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 NME1P1-201ENST00000420914 382 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AL133325.1-201ENST00000421090 382 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC108075.1-201ENST00000424692 529 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC092757.1-201ENST00000467293 467 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC012181.1-201ENST00000479895 423 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 BDH2P1-201ENST00000602288 736 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 U4atac.1-201ENST00000618345 95 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 OR11H2-202ENST00000641517 1085 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 ERICH3-201ENST00000326665 7159 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 MEIS2-202ENST00000338564 4829 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 MEIS2-222ENST00000561208 4822 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 DCLK3-201ENST00000416516 5344 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 HNRNPA3-202ENST00000411529 5688 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 IST1-208ENST00000535424 4082 ntTSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 MED12-203ENST00000374102 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 CRTAP-201ENST00000320954 6630 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 LAMA4-205ENST00000389463 6297 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms