Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.23□□□□□ -1.41
HPS3Q969F9 HSPE1P22-201ENST00000456856 327 ntBASIC6.23□□□□□ -1.41
HPS3Q969F9 AC020898.1-201ENST00000474167 787 ntBASIC6.23□□□□□ -1.41
HPS3Q969F9 RPS17P5-201ENST00000498293 408 ntBASIC6.23□□□□□ -1.41
HPS3Q969F9 AC104109.1-201ENST00000498563 436 ntBASIC6.23□□□□□ -1.41
HPS3Q969F9 RNU6-276P-201ENST00000516114 96 ntBASIC6.23□□□□□ -1.41
HPS3Q969F9 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC6.23□□□□□ -1.41
HPS3Q969F9 HIGD1AP18-201ENST00000520730 278 ntBASIC6.23□□□□□ -1.41
HPS3Q969F9 MAL2-205ENST00000521048 575 ntTSL 4 BASIC6.23□□□□□ -1.41
HPS3Q969F9 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.23□□□□□ -1.41
HPS3Q969F9 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.23□□□□□ -1.41
HPS3Q969F9 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.23□□□□□ -1.41
HPS3Q969F9 AL022067.1-201ENST00000602426 454 ntBASIC6.23□□□□□ -1.41
HPS3Q969F9 RPP40P2-201ENST00000603596 712 ntBASIC6.23□□□□□ -1.41
HPS3Q969F9 AC112220.2-201ENST00000605513 533 ntBASIC6.23□□□□□ -1.41
HPS3Q969F9 AP000894.4-201ENST00000610185 483 ntBASIC6.23□□□□□ -1.41
HPS3Q969F9 CYCSP41-201ENST00000616920 296 ntBASIC6.23□□□□□ -1.41
HPS3Q969F9 MIR6729-201ENST00000618194 65 ntBASIC6.23□□□□□ -1.41
HPS3Q969F9 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.23□□□□□ -1.41
HPS3Q969F9 AL109659.3-201ENST00000624985 950 ntBASIC6.23□□□□□ -1.41
HPS3Q969F9 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.23□□□□□ -1.41
HPS3Q969F9 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
HPS3Q969F9 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.23□□□□□ -1.41
HPS3Q969F9 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.23□□□□□ -1.41
HPS3Q969F9 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HPS3Q969F9 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HPS3Q969F9 AC006484.1-201ENST00000435086 1884 ntBASIC6.23□□□□□ -1.41
HPS3Q969F9 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.23□□□□□ -1.41
HPS3Q969F9 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
HPS3Q969F9 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.23□□□□□ -1.41
HPS3Q969F9 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.23□□□□□ -1.41
HPS3Q969F9 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.23□□□□□ -1.41
HPS3Q969F9 AC006206.1-201ENST00000544842 3387 ntBASIC6.23□□□□□ -1.41
HPS3Q969F9 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.23□□□□□ -1.41
HPS3Q969F9 MT-RNR2-201ENST00000387347 1559 ntBASIC6.23□□□□□ -1.41
HPS3Q969F9 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.22□□□□□ -1.41
HPS3Q969F9 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
HPS3Q969F9 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
HPS3Q969F9 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
HPS3Q969F9 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.22□□□□□ -1.41
HPS3Q969F9 MIR142-201ENST00000384835 87 ntBASIC6.22□□□□□ -1.41
HPS3Q969F9 MRPS21P2-201ENST00000424704 264 ntBASIC6.22□□□□□ -1.41
HPS3Q969F9 ZNF736P7Y-201ENST00000425158 820 ntBASIC6.22□□□□□ -1.41
HPS3Q969F9 AC093422.3-201ENST00000428506 305 ntBASIC6.22□□□□□ -1.41
HPS3Q969F9 FO393419.3-201ENST00000428741 282 ntBASIC6.22□□□□□ -1.41
HPS3Q969F9 AL022331.1-201ENST00000429025 477 ntBASIC6.22□□□□□ -1.41
HPS3Q969F9 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HPS3Q969F9 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HPS3Q969F9 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC6.22□□□□□ -1.41
HPS3Q969F9 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC6.22□□□□□ -1.41
HPS3Q969F9 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.22□□□□□ -1.41
HPS3Q969F9 AL096803.2-201ENST00000450032 677 ntBASIC6.22□□□□□ -1.41
HPS3Q969F9 AC084754.1-201ENST00000463466 464 ntBASIC6.22□□□□□ -1.41
HPS3Q969F9 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.22□□□□□ -1.41
HPS3Q969F9 OR7E157P-201ENST00000494376 911 ntBASIC6.22□□□□□ -1.41
HPS3Q969F9 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.22□□□□□ -1.41
HPS3Q969F9 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.22□□□□□ -1.41
HPS3Q969F9 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HPS3Q969F9 SNORD46.2-201ENST00000516021 102 ntBASIC6.22□□□□□ -1.41
HPS3Q969F9 SNORA43.3-201ENST00000517240 103 ntBASIC6.22□□□□□ -1.41
HPS3Q969F9 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC6.22□□□□□ -1.41
HPS3Q969F9 NPM1P35-201ENST00000533043 868 ntBASIC6.22□□□□□ -1.41
HPS3Q969F9 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.22□□□□□ -1.41
HPS3Q969F9 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC6.22□□□□□ -1.41
HPS3Q969F9 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.22□□□□□ -1.41
HPS3Q969F9 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.22□□□□□ -1.41
HPS3Q969F9 AC007448.1-201ENST00000582714 234 ntBASIC6.22□□□□□ -1.41
HPS3Q969F9 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.22□□□□□ -1.41
HPS3Q969F9 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.22□□□□□ -1.41
HPS3Q969F9 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC6.22□□□□□ -1.41
HPS3Q969F9 AL049844.2-201ENST00000604280 628 ntBASIC6.22□□□□□ -1.41
HPS3Q969F9 NANOGP3-201ENST00000605855 286 ntBASIC6.22□□□□□ -1.41
HPS3Q969F9 AC093673.2-201ENST00000609674 331 ntBASIC6.22□□□□□ -1.41
HPS3Q969F9 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.22□□□□□ -1.41
HPS3Q969F9 AP004607.9-201ENST00000618202 316 ntBASIC6.22□□□□□ -1.41
HPS3Q969F9 AC010435.1-201ENST00000623353 1177 ntBASIC6.22□□□□□ -1.41
HPS3Q969F9 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.22□□□□□ -1.41
HPS3Q969F9 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.22□□□□□ -1.41
HPS3Q969F9 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HPS3Q969F9 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HPS3Q969F9 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HPS3Q969F9 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.22□□□□□ -1.41
HPS3Q969F9 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
HPS3Q969F9 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.22□□□□□ -1.41
HPS3Q969F9 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HPS3Q969F9 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
HPS3Q969F9 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
HPS3Q969F9 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.22□□□□□ -1.41
HPS3Q969F9 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
HPS3Q969F9 AL132640.2-201ENST00000559968 1698 ntBASIC6.21□□□□□ -1.42
HPS3Q969F9 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.21□□□□□ -1.42
HPS3Q969F9 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HPS3Q969F9 RNA5SP131-201ENST00000365452 119 ntBASIC6.21□□□□□ -1.42
HPS3Q969F9 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
HPS3Q969F9 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.21□□□□□ -1.42
HPS3Q969F9 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC6.21□□□□□ -1.42
HPS3Q969F9 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
HPS3Q969F9 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.21□□□□□ -1.42
HPS3Q969F9 MTATP6P17-201ENST00000431030 672 ntBASIC6.21□□□□□ -1.42
HPS3Q969F9 YWHAZP2-201ENST00000440317 728 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms