Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC034105.4-201ENST00000568304 277 ntBASIC8.13□□□□□ -1.11
TOPBP1Q92547 AL445567.2-201ENST00000618935 498 ntBASIC8.13□□□□□ -1.11
TOPBP1Q92547 AL049536.1-201ENST00000625043 744 ntBASIC8.13□□□□□ -1.11
TOPBP1Q92547 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC8.13□□□□□ -1.11
TOPBP1Q92547 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
TOPBP1Q92547 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC8.13□□□□□ -1.11
TOPBP1Q92547 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TOPBP1Q92547 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC8.13□□□□□ -1.11
TOPBP1Q92547 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
TOPBP1Q92547 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
TOPBP1Q92547 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
TOPBP1Q92547 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TOPBP1Q92547 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TOPBP1Q92547 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC8.13□□□□□ -1.11
TOPBP1Q92547 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC8.13□□□□□ -1.11
TOPBP1Q92547 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
TOPBP1Q92547 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
TOPBP1Q92547 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TOPBP1Q92547 RNU1-64P-201ENST00000365443 163 ntBASIC8.13□□□□□ -1.11
TOPBP1Q92547 SNORA70C-201ENST00000384538 135 ntBASIC8.13□□□□□ -1.11
TOPBP1Q92547 AL035079.1-201ENST00000405210 287 ntBASIC8.13□□□□□ -1.11
TOPBP1Q92547 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC8.13□□□□□ -1.11
TOPBP1Q92547 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC8.13□□□□□ -1.11
TOPBP1Q92547 AC015795.1-201ENST00000513669 327 ntBASIC8.13□□□□□ -1.11
TOPBP1Q92547 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC8.13□□□□□ -1.11
TOPBP1Q92547 MED28P5-201ENST00000528254 438 ntBASIC8.13□□□□□ -1.11
TOPBP1Q92547 AC069061.3-201ENST00000582254 823 ntBASIC8.13□□□□□ -1.11
TOPBP1Q92547 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC8.13□□□□□ -1.11
TOPBP1Q92547 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC8.13□□□□□ -1.11
TOPBP1Q92547 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC8.12□□□□□ -1.11
TOPBP1Q92547 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TOPBP1Q92547 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
TOPBP1Q92547 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC8.12□□□□□ -1.11
TOPBP1Q92547 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC8.12□□□□□ -1.11
TOPBP1Q92547 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC8.12□□□□□ -1.11
TOPBP1Q92547 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TOPBP1Q92547 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
TOPBP1Q92547 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TOPBP1Q92547 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TOPBP1Q92547 MIR659-201ENST00000384963 97 ntBASIC8.12□□□□□ -1.11
TOPBP1Q92547 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
TOPBP1Q92547 RPL36AP36-201ENST00000418616 301 ntBASIC8.12□□□□□ -1.11
TOPBP1Q92547 AC140479.3-201ENST00000418944 1126 ntBASIC8.12□□□□□ -1.11
TOPBP1Q92547 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC8.12□□□□□ -1.11
TOPBP1Q92547 AC079168.2-201ENST00000453977 416 ntBASIC8.12□□□□□ -1.11
TOPBP1Q92547 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC8.12□□□□□ -1.11
TOPBP1Q92547 AC023424.1-201ENST00000496058 459 ntBASIC8.12□□□□□ -1.11
TOPBP1Q92547 AC073358.1-201ENST00000505671 684 ntBASIC8.12□□□□□ -1.11
TOPBP1Q92547 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC8.12□□□□□ -1.11
TOPBP1Q92547 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC8.12□□□□□ -1.11
TOPBP1Q92547 AC090948.1-201ENST00000607464 549 ntBASIC8.12□□□□□ -1.11
TOPBP1Q92547 AP000843.1-201ENST00000624880 701 ntBASIC8.12□□□□□ -1.11
TOPBP1Q92547 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
TOPBP1Q92547 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TOPBP1Q92547 AL355488.2-201ENST00000609909 2850 ntBASIC8.12□□□□□ -1.11
TOPBP1Q92547 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
TOPBP1Q92547 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC8.12□□□□□ -1.11
TOPBP1Q92547 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC8.11□□□□□ -1.11
TOPBP1Q92547 AC025574.1-201ENST00000554784 1653 ntBASIC8.11□□□□□ -1.11
TOPBP1Q92547 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
TOPBP1Q92547 SNORA73.1-201ENST00000363107 205 ntBASIC8.11□□□□□ -1.11
TOPBP1Q92547 RNA5SP171-201ENST00000391071 115 ntBASIC8.11□□□□□ -1.11
TOPBP1Q92547 ATP5F1P2-201ENST00000398143 760 ntBASIC8.11□□□□□ -1.11
TOPBP1Q92547 CASKP1-201ENST00000412870 582 ntBASIC8.11□□□□□ -1.11
TOPBP1Q92547 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC8.11□□□□□ -1.11
TOPBP1Q92547 snoU13.22-201ENST00000459428 104 ntBASIC8.11□□□□□ -1.11
TOPBP1Q92547 RNU1-6P-201ENST00000516290 144 ntBASIC8.11□□□□□ -1.11
TOPBP1Q92547 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC8.11□□□□□ -1.11
TOPBP1Q92547 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC8.11□□□□□ -1.11
TOPBP1Q92547 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC8.11□□□□□ -1.11
TOPBP1Q92547 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC8.11□□□□□ -1.11
TOPBP1Q92547 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC8.11□□□□□ -1.11
TOPBP1Q92547 AP001267.4-201ENST00000602598 545 ntBASIC8.11□□□□□ -1.11
TOPBP1Q92547 AL133338.2-201ENST00000604292 736 ntBASIC8.11□□□□□ -1.11
TOPBP1Q92547 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC8.11□□□□□ -1.11
TOPBP1Q92547 ACTR3BP2-202ENST00000623630 1338 ntBASIC8.11□□□□□ -1.11
TOPBP1Q92547 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
TOPBP1Q92547 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
TOPBP1Q92547 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
TOPBP1Q92547 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
TOPBP1Q92547 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
TOPBP1Q92547 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
TOPBP1Q92547 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
TOPBP1Q92547 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
TOPBP1Q92547 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC8.1□□□□□ -1.11
TOPBP1Q92547 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
TOPBP1Q92547 RN7SKP280-201ENST00000364196 304 ntBASIC8.1□□□□□ -1.11
TOPBP1Q92547 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
TOPBP1Q92547 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
TOPBP1Q92547 RPL23AP59-201ENST00000399415 461 ntBASIC8.1□□□□□ -1.11
TOPBP1Q92547 AL358176.3-201ENST00000420757 454 ntBASIC8.1□□□□□ -1.11
TOPBP1Q92547 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC8.1□□□□□ -1.11
TOPBP1Q92547 AL162591.2-201ENST00000449634 317 ntBASIC8.1□□□□□ -1.11
TOPBP1Q92547 AC106806.2-201ENST00000509365 500 ntBASIC8.1□□□□□ -1.11
TOPBP1Q92547 RN7SKP248-201ENST00000516278 305 ntBASIC8.1□□□□□ -1.11
TOPBP1Q92547 MIR4420-201ENST00000583944 77 ntBASIC8.1□□□□□ -1.11
TOPBP1Q92547 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC8.1□□□□□ -1.11
TOPBP1Q92547 AL049794.2-201ENST00000616301 365 ntBASIC8.1□□□□□ -1.11
TOPBP1Q92547 AC002525.1-201ENST00000624392 1622 ntBASIC8.1□□□□□ -1.11
TOPBP1Q92547 RNA5SP196-201ENST00000625967 102 ntBASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms