Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 OR5H2-201ENST00000355273 945 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 RNU6-707P-201ENST00000364647 95 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 GSTA8P-201ENST00000404253 637 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 RPS3AP2-201ENST00000407190 754 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 RPS7P8-201ENST00000418311 581 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 RPL35AP31-201ENST00000418340 337 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 PTP4A1P5-201ENST00000420305 455 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 RPL7P53-201ENST00000421245 739 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 TXNL1P1-201ENST00000429528 554 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 DEFA9P-201ENST00000433042 285 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 HSD52-202ENST00000436225 772 ntTSL 3 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 VPS25P1-201ENST00000455691 508 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 AC104971.1-201ENST00000495117 578 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 FTH1P8-201ENST00000498161 514 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 AC090058.1-201ENST00000498788 435 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 CCDC11P1-201ENST00000503137 1162 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 AC093755.1-201ENST00000512950 1023 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 RPL7L1P4-201ENST00000513004 707 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 IGLV3-6-201ENST00000523937 250 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 PDCL2P2-201ENST00000533651 189 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 AP001858.2-201ENST00000536213 601 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 AC080013.3-201ENST00000606839 578 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 VIS1.1-201ENST00000610517 203 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 AL352984.2-201ENST00000611153 546 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 AC100847.1-201ENST00000611316 481 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 AC107075.1-201ENST00000613695 314 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 AL139407.1-201ENST00000613826 1175 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 AC004943.3-201ENST00000624116 600 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 MIR3974-201ENST00000637126 96 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 OR8B1P-202ENST00000641132 1178 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 SAMMSON-209ENST00000641222 1100 ntBASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNPOQ8N3V7 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 RBMY1HP-201ENST00000382759 1389 ntBASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 AC024651.2-201ENST00000562480 2098 ntBASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 AL442128.2-201ENST00000620246 1824 ntBASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SYNPOQ8N3V7 TAF9BP1-201ENST00000396646 746 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms