Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 AC098828.2-201ENST00000452342 573 ntTSL 2 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 RPL37P3-201ENST00000456825 293 ntBASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 SSU72P8-201ENST00000473520 585 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 RN7SL705P-201ENST00000481678 294 ntBASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 AC008592.1-201ENST00000503091 665 ntTSL 3 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 CC2D2A-205ENST00000503658 605 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 LINC02428-203ENST00000513793 438 ntTSL 5 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 AC087280.1-201ENST00000530632 1003 ntBASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 RPL35AP25-201ENST00000584631 330 ntBASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 OR7A18P-201ENST00000600416 277 ntBASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 RN7SL840P-201ENST00000606883 284 ntBASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 CASC19-232ENST00000641480 1244 ntBASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 HDAC1P2-201ENST00000453661 1398 ntBASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 AL161725.1-201ENST00000591577 1351 ntTSL 5 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AC138915.4-201ENST00000565549 4147 ntBASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AC096992.2-201ENST00000609553 1684 ntBASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 Y_RNA.86-201ENST00000363020 111 ntBASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 SSX9-201ENST00000376909 591 ntBASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 RNU6-767P-201ENST00000384132 107 ntBASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AC133644.1-201ENST00000398171 937 ntBASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 OR4F7P-201ENST00000402444 931 ntBASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AC092042.2-201ENST00000417304 331 ntBASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 GAPDHP57-201ENST00000424400 585 ntBASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AC004160.2-201ENST00000425837 563 ntTSL 4 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 KRTAP9-11P-201ENST00000431013 525 ntBASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AL022721.1-201ENST00000436521 505 ntBASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 ABRACL-202ENST00000461027 456 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 RPS15AP17-201ENST00000470598 390 ntBASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 NPM1P27-201ENST00000502784 830 ntBASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AC008638.2-201ENST00000503840 715 ntBASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AC010486.1-201ENST00000511793 424 ntBASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 RNU6-445P-201ENST00000516949 107 ntBASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AL132712.1-201ENST00000555967 582 ntTSL 4 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 MIR4795-201ENST00000584182 89 ntBASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AC090699.1-201ENST00000586264 321 ntBASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AC010928.3-201ENST00000587712 541 ntBASIC7.04□□□□□ -1.28
DEPDC4Q8N2C3 AC011712.1-201ENST00000588959 234 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms