Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 OR4V1P-201ENST00000525394 1140 ntBASIC5.69□□□□□ -1.5
VRK3Q8IV63 MTND2P26-201ENST00000528255 1029 ntBASIC5.69□□□□□ -1.5
VRK3Q8IV63 AP000648.1-201ENST00000529682 397 ntBASIC5.69□□□□□ -1.5
VRK3Q8IV63 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.69□□□□□ -1.5
VRK3Q8IV63 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VRK3Q8IV63 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.69□□□□□ -1.5
VRK3Q8IV63 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.69□□□□□ -1.5
VRK3Q8IV63 AC025918.2-201ENST00000558683 763 ntBASIC5.69□□□□□ -1.5
VRK3Q8IV63 AC090888.3-201ENST00000558917 509 ntBASIC5.69□□□□□ -1.5
VRK3Q8IV63 NPM1P42-201ENST00000560329 862 ntBASIC5.69□□□□□ -1.5
VRK3Q8IV63 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.69□□□□□ -1.5
VRK3Q8IV63 MIR4801-201ENST00000582704 82 ntBASIC5.69□□□□□ -1.5
VRK3Q8IV63 AC006115.2-201ENST00000596823 202 ntBASIC5.69□□□□□ -1.5
VRK3Q8IV63 AC005034.4-201ENST00000603612 899 ntBASIC5.69□□□□□ -1.5
VRK3Q8IV63 Z82195.1-201ENST00000604558 398 ntBASIC5.69□□□□□ -1.5
VRK3Q8IV63 FAM27E4-201ENST00000605259 342 ntBASIC5.69□□□□□ -1.5
VRK3Q8IV63 AL031601.1-201ENST00000605702 394 ntBASIC5.69□□□□□ -1.5
VRK3Q8IV63 AC024060.1-201ENST00000607052 494 ntBASIC5.69□□□□□ -1.5
VRK3Q8IV63 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC5.69□□□□□ -1.5
VRK3Q8IV63 AP005431.1-201ENST00000618479 319 ntBASIC5.69□□□□□ -1.5
VRK3Q8IV63 AC073534.2-201ENST00000620377 381 ntBASIC5.69□□□□□ -1.5
VRK3Q8IV63 AL603839.4-201ENST00000624658 1005 ntBASIC5.69□□□□□ -1.5
VRK3Q8IV63 OR5BE1P-202ENST00000641168 1176 ntBASIC5.69□□□□□ -1.5
VRK3Q8IV63 BX284613.1-201ENST00000452221 1641 ntBASIC5.69□□□□□ -1.5
VRK3Q8IV63 AC008432.1-201ENST00000615912 1320 ntBASIC5.69□□□□□ -1.5
VRK3Q8IV63 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.69□□□□□ -1.5
VRK3Q8IV63 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VRK3Q8IV63 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.69□□□□□ -1.5
VRK3Q8IV63 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.69□□□□□ -1.5
VRK3Q8IV63 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
VRK3Q8IV63 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.69□□□□□ -1.5
VRK3Q8IV63 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VRK3Q8IV63 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
VRK3Q8IV63 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
VRK3Q8IV63 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
VRK3Q8IV63 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VRK3Q8IV63 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VRK3Q8IV63 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VRK3Q8IV63 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VRK3Q8IV63 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
VRK3Q8IV63 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VRK3Q8IV63 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 AL021331.1-201ENST00000402817 582 ntBASIC5.68□□□□□ -1.5
VRK3Q8IV63 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.68□□□□□ -1.5
VRK3Q8IV63 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VRK3Q8IV63 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 AL035660.1-201ENST00000422041 222 ntBASIC5.68□□□□□ -1.5
VRK3Q8IV63 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VRK3Q8IV63 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 RPL23AP23-201ENST00000452590 471 ntBASIC5.68□□□□□ -1.5
VRK3Q8IV63 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 RPL12P39-201ENST00000455456 496 ntBASIC5.68□□□□□ -1.5
VRK3Q8IV63 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 UBFD1P1-201ENST00000473259 814 ntBASIC5.68□□□□□ -1.5
VRK3Q8IV63 AC079080.1-201ENST00000479841 822 ntBASIC5.68□□□□□ -1.5
VRK3Q8IV63 AC099521.1-201ENST00000482557 334 ntBASIC5.68□□□□□ -1.5
VRK3Q8IV63 AC011037.1-201ENST00000483964 558 ntBASIC5.68□□□□□ -1.5
VRK3Q8IV63 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 HMGN2P36-201ENST00000529541 409 ntBASIC5.68□□□□□ -1.5
VRK3Q8IV63 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VRK3Q8IV63 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 AC126615.2-201ENST00000553003 515 ntBASIC5.68□□□□□ -1.5
VRK3Q8IV63 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 DPPA3P2-202ENST00000557188 1219 ntBASIC5.68□□□□□ -1.5
VRK3Q8IV63 AC092868.3-201ENST00000560515 784 ntBASIC5.68□□□□□ -1.5
VRK3Q8IV63 AC104229.1-201ENST00000561364 255 ntBASIC5.68□□□□□ -1.5
VRK3Q8IV63 AC135628.1-201ENST00000568867 534 ntBASIC5.68□□□□□ -1.5
VRK3Q8IV63 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 DPRXP4-201ENST00000578053 568 ntBASIC5.68□□□□□ -1.5
VRK3Q8IV63 MTATP6P3-201ENST00000581686 676 ntBASIC5.68□□□□□ -1.5
VRK3Q8IV63 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VRK3Q8IV63 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VRK3Q8IV63 AC027243.2-201ENST00000602530 724 ntBASIC5.68□□□□□ -1.5
VRK3Q8IV63 AP003465.2-201ENST00000602571 373 ntBASIC5.68□□□□□ -1.5
VRK3Q8IV63 HMGB1P51-201ENST00000605166 638 ntBASIC5.68□□□□□ -1.5
VRK3Q8IV63 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.68□□□□□ -1.5
VRK3Q8IV63 AC067852.7-201ENST00000623270 535 ntBASIC5.68□□□□□ -1.5
VRK3Q8IV63 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 MIR1322-201ENST00000638013 71 ntBASIC5.68□□□□□ -1.5
VRK3Q8IV63 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.68□□□□□ -1.5
VRK3Q8IV63 AC132825.8-201ENST00000640783 297 ntBASIC5.68□□□□□ -1.5
VRK3Q8IV63 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms