Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC023141.9-201ENST00000458734 412 ntBASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 PPIAP21-201ENST00000464473 501 ntBASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 CCDC75P1-201ENST00000469247 791 ntBASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 AC090602.1-201ENST00000469695 252 ntBASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 RN7SKP253-201ENST00000516424 309 ntBASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 AC012146.2-201ENST00000576545 416 ntBASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 PPATP2-201ENST00000605635 508 ntBASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 AL356490.1-201ENST00000623079 479 ntBASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 AC004158.1-201ENST00000564508 4319 ntBASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 RNA5SP223-201ENST00000365174 120 ntBASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 RNU6-532P-201ENST00000384318 107 ntBASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 RN7SKP247-201ENST00000411094 308 ntBASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 AC048351.1-201ENST00000420064 602 ntBASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 RPS27AP6-201ENST00000427962 448 ntBASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 RPS20P1-201ENST00000434853 354 ntBASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 RPL12P46-201ENST00000436610 195 ntBASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 MTND6P18-201ENST00000439477 513 ntBASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 RNU6-1218P-201ENST00000458990 108 ntBASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 RNU7-27P-201ENST00000459281 62 ntBASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 AC008410.1-201ENST00000483777 339 ntBASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 AL136038.1-201ENST00000497246 351 ntBASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 RN7SL466P-201ENST00000497546 295 ntBASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 AC122688.1-201ENST00000541494 223 ntBASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 AC015720.2-201ENST00000567709 334 ntBASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 AC020978.7-201ENST00000575953 1187 ntBASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 MIR1273E-201ENST00000581165 102 ntBASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 MIR7853-201ENST00000584820 132 ntBASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 AC011445.2-201ENST00000599274 173 ntBASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 OR4H6P-202ENST00000603819 340 ntBASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 AC104695.2-201ENST00000605056 775 ntBASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 RPL21P136-201ENST00000605378 396 ntBASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 AC025574.2-201ENST00000615621 514 ntBASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 MIR4302-201ENST00000638058 60 ntBASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NUP54Q7Z3B4 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
NUP54Q7Z3B4 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.12□□□□□ -1.59
NUP54Q7Z3B4 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NUP54Q7Z3B4 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUP54Q7Z3B4 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.12□□□□□ -1.59
NUP54Q7Z3B4 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.12□□□□□ -1.59
NUP54Q7Z3B4 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUP54Q7Z3B4 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUP54Q7Z3B4 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NUP54Q7Z3B4 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUP54Q7Z3B4 RNA5SP326-201ENST00000363209 110 ntBASIC5.12□□□□□ -1.59
NUP54Q7Z3B4 RN7SKP28-201ENST00000364770 305 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms