Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS13CQ709C8 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS13CQ709C8 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
VPS13CQ709C8 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS13CQ709C8 RPL7AP25-201ENST00000423357 805 ntBASIC3.88□□□□□ -1.79
VPS13CQ709C8 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS13CQ709C8 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS13CQ709C8 AC053481.1-201ENST00000467217 306 ntBASIC3.88□□□□□ -1.79
VPS13CQ709C8 UQCRHP4-201ENST00000471686 272 ntBASIC3.88□□□□□ -1.79
VPS13CQ709C8 TBCA-207ENST00000520039 157 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS13CQ709C8 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS13CQ709C8 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS13CQ709C8 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS13CQ709C8 AL683813.2-201ENST00000605245 502 ntBASIC3.88□□□□□ -1.79
VPS13CQ709C8 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS13CQ709C8 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS13CQ709C8 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS13CQ709C8 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
VPS13CQ709C8 PRICKLE1-213ENST00000639589 5761 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
VPS13CQ709C8 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS13CQ709C8 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS13CQ709C8 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS13CQ709C8 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS13CQ709C8 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS13CQ709C8 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS13CQ709C8 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS13CQ709C8 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS13CQ709C8 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS13CQ709C8 OR5P1P-201ENST00000299512 925 ntBASIC3.88□□□□□ -1.79
VPS13CQ709C8 COX6CP15-201ENST00000426313 211 ntBASIC3.88□□□□□ -1.79
VPS13CQ709C8 AC046176.1-201ENST00000435260 1170 ntBASIC3.88□□□□□ -1.79
VPS13CQ709C8 RPL23AP2-201ENST00000471227 466 ntBASIC3.88□□□□□ -1.79
VPS13CQ709C8 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS13CQ709C8 AC010547.7-201ENST00000570323 333 ntBASIC3.88□□□□□ -1.79
VPS13CQ709C8 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS13CQ709C8 MIR4420-201ENST00000583944 77 ntBASIC3.88□□□□□ -1.79
VPS13CQ709C8 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS13CQ709C8 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS13CQ709C8 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
VPS13CQ709C8 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS13CQ709C8 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS13CQ709C8 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
VPS13CQ709C8 MITF-203ENST00000328528 4680 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS13CQ709C8 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS13CQ709C8 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS13CQ709C8 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS13CQ709C8 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS13CQ709C8 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.88□□□□□ -1.79
VPS13CQ709C8 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS13CQ709C8 RNU1-132P-201ENST00000364300 164 ntBASIC3.88□□□□□ -1.79
VPS13CQ709C8 AL590762.2-201ENST00000395798 571 ntBASIC3.88□□□□□ -1.79
VPS13CQ709C8 AC233289.1-201ENST00000403700 508 ntBASIC3.88□□□□□ -1.79
VPS13CQ709C8 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS13CQ709C8 AL390879.1-201ENST00000439143 386 ntBASIC3.88□□□□□ -1.79
VPS13CQ709C8 AC079168.2-201ENST00000453977 416 ntBASIC3.88□□□□□ -1.79
VPS13CQ709C8 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS13CQ709C8 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
VPS13CQ709C8 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS13CQ709C8 RN7SL290P-201ENST00000578661 300 ntBASIC3.88□□□□□ -1.79
VPS13CQ709C8 AC017100.2-201ENST00000584628 355 ntBASIC3.88□□□□□ -1.79
VPS13CQ709C8 AC140479.6-201ENST00000633535 357 ntBASIC3.88□□□□□ -1.79
VPS13CQ709C8 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS13CQ709C8 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS13CQ709C8 NBPF8-201ENST00000583271 5330 ntBASIC3.88□□□□□ -1.79
VPS13CQ709C8 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS13CQ709C8 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS13CQ709C8 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC3.87□□□□□ -1.79
VPS13CQ709C8 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
VPS13CQ709C8 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
VPS13CQ709C8 LRRC37BP1-201ENST00000398851 714 ntBASIC3.87□□□□□ -1.79
VPS13CQ709C8 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS13CQ709C8 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS13CQ709C8 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS13CQ709C8 IGHVIII-13-1-201ENST00000517613 291 ntBASIC3.87□□□□□ -1.79
VPS13CQ709C8 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS13CQ709C8 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS13CQ709C8 MTCO1P49-201ENST00000523429 802 ntBASIC3.87□□□□□ -1.79
VPS13CQ709C8 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC3.87□□□□□ -1.79
VPS13CQ709C8 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC3.87□□□□□ -1.79
VPS13CQ709C8 OR4A6P-201ENST00000534364 970 ntBASIC3.87□□□□□ -1.79
VPS13CQ709C8 NDUFB4P11-201ENST00000560510 395 ntBASIC3.87□□□□□ -1.79
VPS13CQ709C8 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS13CQ709C8 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS13CQ709C8 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS13CQ709C8 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS13CQ709C8 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS13CQ709C8 MAPK6PS2-201ENST00000379571 2060 ntBASIC3.87□□□□□ -1.79
VPS13CQ709C8 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS13CQ709C8 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS13CQ709C8 AL391684.1-202ENST00000641293 1636 ntBASIC3.87□□□□□ -1.79
VPS13CQ709C8 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
VPS13CQ709C8 EYA4-203ENST00000367895 5699 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS13CQ709C8 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS13CQ709C8 AC090589.1-201ENST00000473109 362 ntBASIC3.87□□□□□ -1.79
VPS13CQ709C8 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.87□□□□□ -1.79
VPS13CQ709C8 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS13CQ709C8 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS13CQ709C8 AL162574.1-201ENST00000615702 950 ntBASIC3.87□□□□□ -1.79
VPS13CQ709C8 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS13CQ709C8 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms