Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MIR6886-201ENST00000619864 61 ntBASIC8.33□□□□□ -1.08
RC3H1Q5TC82 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 AC079949.2-201ENST00000617117 2933 ntBASIC8.33□□□□□ -1.08
RC3H1Q5TC82 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 AC132219.2-201ENST00000624416 2327 ntBASIC8.32□□□□□ -1.08
RC3H1Q5TC82 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 HNRNPA1P54-201ENST00000411857 9714 ntBASIC8.32□□□□□ -1.08
RC3H1Q5TC82 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 Y_RNA.18-201ENST00000362461 102 ntBASIC8.32□□□□□ -1.08
RC3H1Q5TC82 DNAJC19P6-201ENST00000401853 280 ntBASIC8.32□□□□□ -1.08
RC3H1Q5TC82 ERMN-202ENST00000409216 746 ntTSL 4 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 AC244452.1-201ENST00000413798 141 ntBASIC8.32□□□□□ -1.08
RC3H1Q5TC82 MTCO3P12-201ENST00000416718 547 ntBASIC8.32□□□□□ -1.08
RC3H1Q5TC82 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 CHEK2P5-201ENST00000423877 246 ntBASIC8.32□□□□□ -1.08
RC3H1Q5TC82 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 AC005189.1-201ENST00000431286 310 ntBASIC8.32□□□□□ -1.08
RC3H1Q5TC82 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 AL645936.1-201ENST00000441979 518 ntBASIC8.32□□□□□ -1.08
RC3H1Q5TC82 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 HMGB1P44-201ENST00000508597 572 ntBASIC8.32□□□□□ -1.08
RC3H1Q5TC82 NAF1-205ENST00000509434 385 ntTSL 3 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 KHDC1P1-201ENST00000511053 508 ntBASIC8.32□□□□□ -1.08
RC3H1Q5TC82 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 NPM1P5-201ENST00000557228 838 ntBASIC8.32□□□□□ -1.08
RC3H1Q5TC82 AC026470.2-201ENST00000561492 181 ntBASIC8.32□□□□□ -1.08
RC3H1Q5TC82 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 PFKM-232ENST00000629846 381 ntTSL 4 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 LINC01616-201ENST00000561816 2280 ntBASIC8.32□□□□□ -1.08
RC3H1Q5TC82 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 AC066616.2-201ENST00000559334 1481 ntBASIC8.32□□□□□ -1.08
RC3H1Q5TC82 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
RC3H1Q5TC82 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 ATM-215ENST00000530958 5718 ntTSL 2 BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 AC106872.5-201ENST00000508856 1416 ntBASIC8.31□□□□□ -1.08
RC3H1Q5TC82 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 FRG1BP-201ENST00000278882 761 ntBASIC8.31□□□□□ -1.08
RC3H1Q5TC82 FRG1CP-201ENST00000358464 769 ntBASIC8.31□□□□□ -1.08
RC3H1Q5TC82 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 MIR365B-201ENST00000362317 111 ntBASIC8.31□□□□□ -1.08
RC3H1Q5TC82 SNORA51.1-201ENST00000363243 140 ntBASIC8.31□□□□□ -1.08
RC3H1Q5TC82 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 AC007068.1-201ENST00000396690 844 ntBASIC8.31□□□□□ -1.08
RC3H1Q5TC82 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 RPS3AP23-201ENST00000401762 784 ntBASIC8.31□□□□□ -1.08
RC3H1Q5TC82 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 AC108059.2-201ENST00000434626 151 ntBASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms