Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC4.72□□□□□ -1.65
RFX4Q33E94 CKS1BP6-201ENST00000424932 240 ntBASIC4.72□□□□□ -1.65
RFX4Q33E94 DSTNP5-201ENST00000427921 523 ntBASIC4.72□□□□□ -1.65
RFX4Q33E94 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.72□□□□□ -1.65
RFX4Q33E94 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.72□□□□□ -1.65
RFX4Q33E94 RPL36AP39-201ENST00000445859 318 ntBASIC4.72□□□□□ -1.65
RFX4Q33E94 VN1R96P-201ENST00000446052 858 ntBASIC4.72□□□□□ -1.65
RFX4Q33E94 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.72□□□□□ -1.65
RFX4Q33E94 AC011225.1-201ENST00000457751 369 ntBASIC4.72□□□□□ -1.65
RFX4Q33E94 AC108751.2-201ENST00000469993 231 ntBASIC4.72□□□□□ -1.65
RFX4Q33E94 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RFX4Q33E94 TCP11X3P-202ENST00000514289 1254 ntBASIC4.72□□□□□ -1.65
RFX4Q33E94 RFPL4AP3-201ENST00000515267 345 ntBASIC4.72□□□□□ -1.65
RFX4Q33E94 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.72□□□□□ -1.65
RFX4Q33E94 HMGB1P40-201ENST00000525121 540 ntBASIC4.72□□□□□ -1.65
RFX4Q33E94 AC090022.1-201ENST00000546569 311 ntBASIC4.72□□□□□ -1.65
RFX4Q33E94 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.72□□□□□ -1.65
RFX4Q33E94 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.72□□□□□ -1.65
RFX4Q33E94 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.72□□□□□ -1.65
RFX4Q33E94 AC010245.2-201ENST00000606908 1167 ntBASIC4.72□□□□□ -1.65
RFX4Q33E94 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RFX4Q33E94 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.72□□□□□ -1.65
RFX4Q33E94 AC245100.2-201ENST00000454544 1679 ntBASIC4.72□□□□□ -1.65
RFX4Q33E94 AL359922.3-201ENST00000624779 1670 ntBASIC4.72□□□□□ -1.65
RFX4Q33E94 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.72□□□□□ -1.65
RFX4Q33E94 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RFX4Q33E94 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RFX4Q33E94 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
RFX4Q33E94 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RFX4Q33E94 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
RFX4Q33E94 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.72□□□□□ -1.65
RFX4Q33E94 CASC19-206ENST00000641028 1430 ntBASIC4.72□□□□□ -1.65
RFX4Q33E94 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
RFX4Q33E94 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.65
RFX4Q33E94 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RFX4Q33E94 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFX4Q33E94 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.71□□□□□ -1.66
RFX4Q33E94 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
RFX4Q33E94 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.71□□□□□ -1.66
RFX4Q33E94 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
RFX4Q33E94 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFX4Q33E94 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFX4Q33E94 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.71□□□□□ -1.66
RFX4Q33E94 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.71□□□□□ -1.66
RFX4Q33E94 MIR105-1-201ENST00000385222 81 ntBASIC4.71□□□□□ -1.66
RFX4Q33E94 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RFX4Q33E94 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.71□□□□□ -1.66
RFX4Q33E94 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.71□□□□□ -1.66
RFX4Q33E94 AL356968.2-201ENST00000412769 1257 ntBASIC4.71□□□□□ -1.66
RFX4Q33E94 AL138899.2-201ENST00000439139 499 ntBASIC4.71□□□□□ -1.66
RFX4Q33E94 AL390119.1-201ENST00000440329 312 ntBASIC4.71□□□□□ -1.66
RFX4Q33E94 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.71□□□□□ -1.66
RFX4Q33E94 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.71□□□□□ -1.66
RFX4Q33E94 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.71□□□□□ -1.66
RFX4Q33E94 RNA5SP373-201ENST00000517271 95 ntBASIC4.71□□□□□ -1.66
RFX4Q33E94 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.71□□□□□ -1.66
RFX4Q33E94 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.71□□□□□ -1.66
RFX4Q33E94 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.71□□□□□ -1.66
RFX4Q33E94 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.71□□□□□ -1.66
RFX4Q33E94 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.71□□□□□ -1.66
RFX4Q33E94 FO393422.1-201ENST00000603908 708 ntBASIC4.71□□□□□ -1.66
RFX4Q33E94 AC015849.6-201ENST00000605454 474 ntBASIC4.71□□□□□ -1.66
RFX4Q33E94 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.71□□□□□ -1.66
RFX4Q33E94 AC074101.1-201ENST00000637861 241 ntBASIC4.71□□□□□ -1.66
RFX4Q33E94 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFX4Q33E94 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFX4Q33E94 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFX4Q33E94 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RFX4Q33E94 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFX4Q33E94 RBPJP2-201ENST00000618187 1444 ntBASIC4.71□□□□□ -1.66
RFX4Q33E94 DDX18P4-201ENST00000511690 1966 ntBASIC4.71□□□□□ -1.66
RFX4Q33E94 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFX4Q33E94 MTND5P23-201ENST00000430812 1655 ntBASIC4.7□□□□□ -1.66
RFX4Q33E94 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RFX4Q33E94 RNF19BPY-201ENST00000458209 1550 ntBASIC4.7□□□□□ -1.66
RFX4Q33E94 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.7□□□□□ -1.66
RFX4Q33E94 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RFX4Q33E94 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
RFX4Q33E94 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RFX4Q33E94 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFX4Q33E94 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFX4Q33E94 RNA5SP335-201ENST00000363817 110 ntBASIC4.7□□□□□ -1.66
RFX4Q33E94 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
RFX4Q33E94 AL512422.1-201ENST00000407033 553 ntBASIC4.7□□□□□ -1.66
RFX4Q33E94 RN7SKP247-201ENST00000411094 308 ntBASIC4.7□□□□□ -1.66
RFX4Q33E94 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.7□□□□□ -1.66
RFX4Q33E94 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.7□□□□□ -1.66
RFX4Q33E94 AC092447.2-201ENST00000435487 669 ntBASIC4.7□□□□□ -1.66
RFX4Q33E94 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.7□□□□□ -1.66
RFX4Q33E94 RPS26P2-201ENST00000440331 348 ntBASIC4.7□□□□□ -1.66
RFX4Q33E94 HMGN1P36-201ENST00000446623 298 ntBASIC4.7□□□□□ -1.66
RFX4Q33E94 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RFX4Q33E94 AL591623.2-201ENST00000449978 222 ntBASIC4.7□□□□□ -1.66
RFX4Q33E94 RHEBP2-201ENST00000450289 600 ntBASIC4.7□□□□□ -1.66
RFX4Q33E94 OR52E7P-201ENST00000452394 933 ntBASIC4.7□□□□□ -1.66
RFX4Q33E94 RANP1-206ENST00000455094 651 ntBASIC4.7□□□□□ -1.66
RFX4Q33E94 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
RFX4Q33E94 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.7□□□□□ -1.66
RFX4Q33E94 RN7SKP5-201ENST00000517045 272 ntBASIC4.7□□□□□ -1.66
RFX4Q33E94 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms