Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC100827.5-201ENST00000615883 426 ntBASIC6.08□□□□□ -1.44
PDS5AQ29RF7 AC006213.4-201ENST00000616184 634 ntBASIC6.08□□□□□ -1.44
PDS5AQ29RF7 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDS5AQ29RF7 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.08□□□□□ -1.44
PDS5AQ29RF7 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
PDS5AQ29RF7 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDS5AQ29RF7 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDS5AQ29RF7 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PDS5AQ29RF7 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDS5AQ29RF7 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDS5AQ29RF7 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDS5AQ29RF7 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
PDS5AQ29RF7 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
PDS5AQ29RF7 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
PDS5AQ29RF7 IRF5P1-201ENST00000504852 2164 ntBASIC6.08□□□□□ -1.44
PDS5AQ29RF7 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDS5AQ29RF7 MAPK10-304ENST00000641341 3984 ntBASIC6.07□□□□□ -1.44
PDS5AQ29RF7 SMG1P7-201ENST00000565246 2704 ntBASIC6.07□□□□□ -1.44
PDS5AQ29RF7 SDAD1P1-202ENST00000524156 2051 ntBASIC6.07□□□□□ -1.44
PDS5AQ29RF7 AC007618.1-201ENST00000366455 732 ntBASIC6.07□□□□□ -1.44
PDS5AQ29RF7 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDS5AQ29RF7 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDS5AQ29RF7 FAM204CP-201ENST00000424489 642 ntBASIC6.07□□□□□ -1.44
PDS5AQ29RF7 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC6.07□□□□□ -1.44
PDS5AQ29RF7 FABP7P2-201ENST00000429946 379 ntBASIC6.07□□□□□ -1.44
PDS5AQ29RF7 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.07□□□□□ -1.44
PDS5AQ29RF7 BTBD7P2-201ENST00000441962 620 ntBASIC6.07□□□□□ -1.44
PDS5AQ29RF7 snoU13.20-201ENST00000459180 104 ntBASIC6.07□□□□□ -1.44
PDS5AQ29RF7 RPS17P2-201ENST00000461663 408 ntBASIC6.07□□□□□ -1.44
PDS5AQ29RF7 RPS29P22-201ENST00000472363 168 ntBASIC6.07□□□□□ -1.44
PDS5AQ29RF7 NPM1P28-201ENST00000492269 840 ntBASIC6.07□□□□□ -1.44
PDS5AQ29RF7 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.07□□□□□ -1.44
PDS5AQ29RF7 AC012339.2-201ENST00000523996 453 ntBASIC6.07□□□□□ -1.44
PDS5AQ29RF7 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.07□□□□□ -1.44
PDS5AQ29RF7 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC6.07□□□□□ -1.44
PDS5AQ29RF7 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.07□□□□□ -1.44
PDS5AQ29RF7 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.07□□□□□ -1.44
PDS5AQ29RF7 EIF1P5-201ENST00000585002 234 ntBASIC6.07□□□□□ -1.44
PDS5AQ29RF7 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.07□□□□□ -1.44
PDS5AQ29RF7 AC005229.3-201ENST00000603438 323 ntBASIC6.07□□□□□ -1.44
PDS5AQ29RF7 AL133406.3-201ENST00000606817 541 ntBASIC6.07□□□□□ -1.44
PDS5AQ29RF7 AL022394.1-201ENST00000606979 292 ntBASIC6.07□□□□□ -1.44
PDS5AQ29RF7 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.07□□□□□ -1.44
PDS5AQ29RF7 AC016911.1-201ENST00000613297 452 ntBASIC6.07□□□□□ -1.44
PDS5AQ29RF7 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.07□□□□□ -1.44
PDS5AQ29RF7 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.07□□□□□ -1.44
PDS5AQ29RF7 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDS5AQ29RF7 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDS5AQ29RF7 AL360270.2-201ENST00000562952 5985 ntBASIC6.07□□□□□ -1.44
PDS5AQ29RF7 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDS5AQ29RF7 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDS5AQ29RF7 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDS5AQ29RF7 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC6.07□□□□□ -1.44
PDS5AQ29RF7 OR9K1P-202ENST00000641111 3217 ntBASIC6.06□□□□□ -1.44
PDS5AQ29RF7 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
PDS5AQ29RF7 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDS5AQ29RF7 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDS5AQ29RF7 AF186996.5-201ENST00000418098 904 ntBASIC6.06□□□□□ -1.44
PDS5AQ29RF7 RPL7AP61-201ENST00000443410 636 ntBASIC6.06□□□□□ -1.44
PDS5AQ29RF7 AC112498.1-201ENST00000444401 332 ntBASIC6.06□□□□□ -1.44
PDS5AQ29RF7 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.06□□□□□ -1.44
PDS5AQ29RF7 AC004980.3-201ENST00000447046 365 ntBASIC6.06□□□□□ -1.44
PDS5AQ29RF7 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC6.06□□□□□ -1.44
PDS5AQ29RF7 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.06□□□□□ -1.44
PDS5AQ29RF7 AC087272.1-201ENST00000523624 533 ntBASIC6.06□□□□□ -1.44
PDS5AQ29RF7 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC6.06□□□□□ -1.44
PDS5AQ29RF7 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.06□□□□□ -1.44
PDS5AQ29RF7 TVP23CP2-201ENST00000571473 623 ntBASIC6.06□□□□□ -1.44
PDS5AQ29RF7 AC005520.3-201ENST00000602874 370 ntBASIC6.06□□□□□ -1.44
PDS5AQ29RF7 AC002069.2-201ENST00000603580 883 ntBASIC6.06□□□□□ -1.44
PDS5AQ29RF7 LSM1P2-201ENST00000604911 322 ntBASIC6.06□□□□□ -1.44
PDS5AQ29RF7 AC015849.6-201ENST00000605454 474 ntBASIC6.06□□□□□ -1.44
PDS5AQ29RF7 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.06□□□□□ -1.44
PDS5AQ29RF7 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.06□□□□□ -1.44
PDS5AQ29RF7 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDS5AQ29RF7 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.06□□□□□ -1.44
PDS5AQ29RF7 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDS5AQ29RF7 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDS5AQ29RF7 AC132825.1-201ENST00000463573 2247 ntBASIC6.06□□□□□ -1.44
PDS5AQ29RF7 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDS5AQ29RF7 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC6.06□□□□□ -1.44
PDS5AQ29RF7 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.06□□□□□ -1.44
PDS5AQ29RF7 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
PDS5AQ29RF7 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDS5AQ29RF7 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDS5AQ29RF7 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC6.06□□□□□ -1.44
PDS5AQ29RF7 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.06□□□□□ -1.44
PDS5AQ29RF7 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PDS5AQ29RF7 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.06□□□□□ -1.44
PDS5AQ29RF7 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDS5AQ29RF7 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
PDS5AQ29RF7 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDS5AQ29RF7 RNA5SP113-201ENST00000410486 84 ntBASIC6.05□□□□□ -1.44
PDS5AQ29RF7 RPL37P18-201ENST00000411602 243 ntBASIC6.05□□□□□ -1.44
PDS5AQ29RF7 GTF2IP5-201ENST00000414608 731 ntBASIC6.05□□□□□ -1.44
PDS5AQ29RF7 HYALP1-201ENST00000417674 1279 ntBASIC6.05□□□□□ -1.44
PDS5AQ29RF7 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.05□□□□□ -1.44
PDS5AQ29RF7 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.05□□□□□ -1.44
PDS5AQ29RF7 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDS5AQ29RF7 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms