Protein–RNA interactions for Protein: Q06547

GABPB1, GA-binding protein subunit beta-1, humanhuman

Predicted RBP Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1Q06547 AC008410.1-201ENST00000483777 339 ntBASIC5.22□□□□□ -1.57
GABPB1Q06547 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.22□□□□□ -1.57
GABPB1Q06547 AL117692.1-201ENST00000494283 713 ntBASIC5.22□□□□□ -1.57
GABPB1Q06547 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.22□□□□□ -1.57
GABPB1Q06547 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.22□□□□□ -1.57
GABPB1Q06547 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.22□□□□□ -1.57
GABPB1Q06547 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.22□□□□□ -1.57
GABPB1Q06547 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.22□□□□□ -1.57
GABPB1Q06547 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.22□□□□□ -1.57
GABPB1Q06547 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.22□□□□□ -1.57
GABPB1Q06547 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.22□□□□□ -1.57
GABPB1Q06547 ARGFXP2-201ENST00000579304 949 ntBASIC5.22□□□□□ -1.57
GABPB1Q06547 AC009303.3-201ENST00000591103 736 ntBASIC5.22□□□□□ -1.57
GABPB1Q06547 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.22□□□□□ -1.57
GABPB1Q06547 AC004241.3-201ENST00000611728 517 ntBASIC5.22□□□□□ -1.57
GABPB1Q06547 AP002967.1-201ENST00000624203 539 ntBASIC5.22□□□□□ -1.57
GABPB1Q06547 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.22□□□□□ -1.57
GABPB1Q06547 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
GABPB1Q06547 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
GABPB1Q06547 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
GABPB1Q06547 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
GABPB1Q06547 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.22□□□□□ -1.57
GABPB1Q06547 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
GABPB1Q06547 AC107027.3-201ENST00000565095 3473 ntBASIC5.22□□□□□ -1.57
GABPB1Q06547 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
GABPB1Q06547 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.22□□□□□ -1.57
GABPB1Q06547 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
GABPB1Q06547 OR10AB1P-202ENST00000641219 1686 ntBASIC5.21□□□□□ -1.57
GABPB1Q06547 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
GABPB1Q06547 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
GABPB1Q06547 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
GABPB1Q06547 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
GABPB1Q06547 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
GABPB1Q06547 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
GABPB1Q06547 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
GABPB1Q06547 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
GABPB1Q06547 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
GABPB1Q06547 AC073136.2-201ENST00000417282 849 ntBASIC5.21□□□□□ -1.58
GABPB1Q06547 SLC35E1P1-201ENST00000419313 864 ntBASIC5.21□□□□□ -1.58
GABPB1Q06547 GAPDHP49-201ENST00000421421 961 ntBASIC5.21□□□□□ -1.58
GABPB1Q06547 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.21□□□□□ -1.58
GABPB1Q06547 AC006335.2-201ENST00000437993 330 ntBASIC5.21□□□□□ -1.58
GABPB1Q06547 RPL7P33-201ENST00000444159 742 ntBASIC5.21□□□□□ -1.58
GABPB1Q06547 AC097463.1-201ENST00000447288 481 ntBASIC5.21□□□□□ -1.58
GABPB1Q06547 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.21□□□□□ -1.58
GABPB1Q06547 AC092865.4-201ENST00000477936 615 ntBASIC5.21□□□□□ -1.58
GABPB1Q06547 SNRPCP11-201ENST00000492453 205 ntBASIC5.21□□□□□ -1.58
GABPB1Q06547 RN7SL558P-201ENST00000497468 299 ntBASIC5.21□□□□□ -1.58
GABPB1Q06547 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.21□□□□□ -1.58
GABPB1Q06547 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.21□□□□□ -1.58
GABPB1Q06547 AC100770.1-201ENST00000532310 322 ntBASIC5.21□□□□□ -1.58
GABPB1Q06547 AC005000.1-201ENST00000536192 288 ntBASIC5.21□□□□□ -1.58
GABPB1Q06547 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.21□□□□□ -1.58
GABPB1Q06547 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.21□□□□□ -1.58
GABPB1Q06547 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.21□□□□□ -1.58
GABPB1Q06547 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
GABPB1Q06547 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.21□□□□□ -1.58
GABPB1Q06547 AC023813.4-201ENST00000607580 580 ntBASIC5.21□□□□□ -1.58
GABPB1Q06547 AC023509.5-201ENST00000617434 807 ntBASIC5.21□□□□□ -1.58
GABPB1Q06547 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
GABPB1Q06547 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.21□□□□□ -1.58
GABPB1Q06547 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
GABPB1Q06547 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.21□□□□□ -1.58
GABPB1Q06547 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
GABPB1Q06547 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
GABPB1Q06547 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
GABPB1Q06547 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
GABPB1Q06547 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
GABPB1Q06547 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
GABPB1Q06547 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
GABPB1Q06547 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
GABPB1Q06547 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
GABPB1Q06547 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.2□□□□□ -1.58
GABPB1Q06547 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
GABPB1Q06547 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
GABPB1Q06547 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
GABPB1Q06547 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
GABPB1Q06547 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.2□□□□□ -1.58
GABPB1Q06547 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
GABPB1Q06547 MIR365B-201ENST00000362317 111 ntBASIC5.2□□□□□ -1.58
GABPB1Q06547 SNORD74.4-201ENST00000364129 80 ntBASIC5.2□□□□□ -1.58
GABPB1Q06547 RNU1-74P-201ENST00000384108 171 ntBASIC5.2□□□□□ -1.58
GABPB1Q06547 MIR191-201ENST00000384873 92 ntBASIC5.2□□□□□ -1.58
GABPB1Q06547 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
GABPB1Q06547 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.2□□□□□ -1.58
GABPB1Q06547 NANOGP6-201ENST00000429190 847 ntBASIC5.2□□□□□ -1.58
GABPB1Q06547 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC5.2□□□□□ -1.58
GABPB1Q06547 AL031681.1-201ENST00000443304 400 ntBASIC5.2□□□□□ -1.58
GABPB1Q06547 RAB28P3-201ENST00000448325 597 ntBASIC5.2□□□□□ -1.58
GABPB1Q06547 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.2□□□□□ -1.58
GABPB1Q06547 GEMIN2P1-201ENST00000454246 752 ntBASIC5.2□□□□□ -1.58
GABPB1Q06547 AC105918.1-201ENST00000474399 838 ntBASIC5.2□□□□□ -1.58
GABPB1Q06547 RPL23AP65-201ENST00000475608 468 ntBASIC5.2□□□□□ -1.58
GABPB1Q06547 AC009120.1-201ENST00000493458 473 ntBASIC5.2□□□□□ -1.58
GABPB1Q06547 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.2□□□□□ -1.58
GABPB1Q06547 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.2□□□□□ -1.58
GABPB1Q06547 PPBPP1-201ENST00000510807 373 ntBASIC5.2□□□□□ -1.58
GABPB1Q06547 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.2□□□□□ -1.58
GABPB1Q06547 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.2□□□□□ -1.58
GABPB1Q06547 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms