Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.84□□□□□ -1.63
HMGCS1Q01581 GTF3AP5-201ENST00000442645 697 ntBASIC4.84□□□□□ -1.63
HMGCS1Q01581 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.84□□□□□ -1.63
HMGCS1Q01581 AC073073.1-201ENST00000493920 463 ntBASIC4.84□□□□□ -1.63
HMGCS1Q01581 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.84□□□□□ -1.63
HMGCS1Q01581 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.84□□□□□ -1.63
HMGCS1Q01581 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.84□□□□□ -1.63
HMGCS1Q01581 RNA5SP34-201ENST00000516887 130 ntBASIC4.84□□□□□ -1.63
HMGCS1Q01581 AC012339.2-201ENST00000523996 453 ntBASIC4.84□□□□□ -1.63
HMGCS1Q01581 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HMGCS1Q01581 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.84□□□□□ -1.63
HMGCS1Q01581 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HMGCS1Q01581 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.84□□□□□ -1.63
HMGCS1Q01581 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HMGCS1Q01581 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
HMGCS1Q01581 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
HMGCS1Q01581 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HMGCS1Q01581 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.84□□□□□ -1.64
HMGCS1Q01581 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
HMGCS1Q01581 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGCS1Q01581 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.83□□□□□ -1.64
HMGCS1Q01581 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGCS1Q01581 AL022393.1-201ENST00000625142 1677 ntBASIC4.83□□□□□ -1.64
HMGCS1Q01581 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGCS1Q01581 AC068446.1-201ENST00000556425 1549 ntBASIC4.83□□□□□ -1.64
HMGCS1Q01581 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HMGCS1Q01581 MTCO1P46-201ENST00000451639 1491 ntBASIC4.83□□□□□ -1.64
HMGCS1Q01581 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.83□□□□□ -1.64
HMGCS1Q01581 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMGCS1Q01581 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HMGCS1Q01581 SNORA17.1-201ENST00000362945 126 ntBASIC4.83□□□□□ -1.64
HMGCS1Q01581 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGCS1Q01581 SNORA70.10-201ENST00000384515 134 ntBASIC4.83□□□□□ -1.64
HMGCS1Q01581 LRRC37BP1-201ENST00000398851 714 ntBASIC4.83□□□□□ -1.64
HMGCS1Q01581 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.83□□□□□ -1.64
HMGCS1Q01581 BX510359.3-201ENST00000422168 306 ntBASIC4.83□□□□□ -1.64
HMGCS1Q01581 NANOGP4-201ENST00000427230 913 ntBASIC4.83□□□□□ -1.64
HMGCS1Q01581 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGCS1Q01581 AL163193.1-201ENST00000444895 788 ntBASIC4.83□□□□□ -1.64
HMGCS1Q01581 HMGB1P4-201ENST00000455362 567 ntBASIC4.83□□□□□ -1.64
HMGCS1Q01581 AC074386.1-201ENST00000476560 767 ntBASIC4.83□□□□□ -1.64
HMGCS1Q01581 RN7SL177P-201ENST00000476596 299 ntBASIC4.83□□□□□ -1.64
HMGCS1Q01581 AC079841.1-201ENST00000481228 950 ntBASIC4.83□□□□□ -1.64
HMGCS1Q01581 AC072052.1-201ENST00000496556 306 ntBASIC4.83□□□□□ -1.64
HMGCS1Q01581 AC010350.1-201ENST00000504908 231 ntBASIC4.83□□□□□ -1.64
HMGCS1Q01581 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGCS1Q01581 AC111000.5-201ENST00000506559 1178 ntBASIC4.83□□□□□ -1.64
HMGCS1Q01581 AP000859.1-201ENST00000525536 307 ntBASIC4.83□□□□□ -1.64
HMGCS1Q01581 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.83□□□□□ -1.64
HMGCS1Q01581 AC005868.1-201ENST00000536421 331 ntBASIC4.83□□□□□ -1.64
HMGCS1Q01581 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.83□□□□□ -1.64
HMGCS1Q01581 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.83□□□□□ -1.64
HMGCS1Q01581 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGCS1Q01581 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.83□□□□□ -1.64
HMGCS1Q01581 AC116553.2-201ENST00000564203 463 ntBASIC4.83□□□□□ -1.64
HMGCS1Q01581 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.83□□□□□ -1.64
HMGCS1Q01581 OR8G7P-201ENST00000616658 848 ntBASIC4.83□□□□□ -1.64
HMGCS1Q01581 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGCS1Q01581 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGCS1Q01581 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.83□□□□□ -1.64
HMGCS1Q01581 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGCS1Q01581 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
HMGCS1Q01581 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HMGCS1Q01581 AC000374.1-201ENST00000434698 1745 ntBASIC4.83□□□□□ -1.64
HMGCS1Q01581 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMGCS1Q01581 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGCS1Q01581 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
HMGCS1Q01581 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMGCS1Q01581 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMGCS1Q01581 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMGCS1Q01581 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMGCS1Q01581 AL590763.1-201ENST00000398297 1545 ntBASIC4.82□□□□□ -1.64
HMGCS1Q01581 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.82□□□□□ -1.64
HMGCS1Q01581 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMGCS1Q01581 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMGCS1Q01581 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.82□□□□□ -1.64
HMGCS1Q01581 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMGCS1Q01581 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMGCS1Q01581 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HMGCS1Q01581 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HMGCS1Q01581 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HMGCS1Q01581 RPL10P10-201ENST00000403509 664 ntBASIC4.82□□□□□ -1.64
HMGCS1Q01581 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.82□□□□□ -1.64
HMGCS1Q01581 RPS29P9-201ENST00000440360 171 ntBASIC4.82□□□□□ -1.64
HMGCS1Q01581 CNOT7P2-201ENST00000441051 832 ntBASIC4.82□□□□□ -1.64
HMGCS1Q01581 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
HMGCS1Q01581 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.82□□□□□ -1.64
HMGCS1Q01581 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMGCS1Q01581 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.82□□□□□ -1.64
HMGCS1Q01581 AC092647.2-201ENST00000452998 253 ntBASIC4.82□□□□□ -1.64
HMGCS1Q01581 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.82□□□□□ -1.64
HMGCS1Q01581 HIGD1AP14-201ENST00000507617 282 ntBASIC4.82□□□□□ -1.64
HMGCS1Q01581 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.82□□□□□ -1.64
HMGCS1Q01581 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.82□□□□□ -1.64
HMGCS1Q01581 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.82□□□□□ -1.64
HMGCS1Q01581 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMGCS1Q01581 RPL23AP53-201ENST00000521854 457 ntBASIC4.82□□□□□ -1.64
HMGCS1Q01581 HNRNPRP2-201ENST00000528421 743 ntBASIC4.82□□□□□ -1.64
HMGCS1Q01581 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMGCS1Q01581 AP002373.2-201ENST00000541631 1060 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms