Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 MIR122-201ENST00000385044 85 ntBASIC4.55□□□□□ -1.68
CX3CL1P78423 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CX3CL1P78423 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CL1P78423 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.55□□□□□ -1.68
CX3CL1P78423 RN7SKP279-201ENST00000411383 298 ntBASIC4.55□□□□□ -1.68
CX3CL1P78423 HMGN1P20-201ENST00000411849 300 ntBASIC4.55□□□□□ -1.68
CX3CL1P78423 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.55□□□□□ -1.68
CX3CL1P78423 OR51A6P-201ENST00000418680 1004 ntBASIC4.55□□□□□ -1.68
CX3CL1P78423 RNGTTP1-201ENST00000420965 728 ntBASIC4.55□□□□□ -1.68
CX3CL1P78423 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.55□□□□□ -1.68
CX3CL1P78423 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.55□□□□□ -1.68
CX3CL1P78423 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.55□□□□□ -1.68
CX3CL1P78423 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.55□□□□□ -1.68
CX3CL1P78423 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CL1P78423 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.55□□□□□ -1.68
CX3CL1P78423 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.55□□□□□ -1.68
CX3CL1P78423 MTND2P2-201ENST00000434633 945 ntBASIC4.55□□□□□ -1.68
CX3CL1P78423 GAPDHP48-201ENST00000436626 961 ntBASIC4.55□□□□□ -1.68
CX3CL1P78423 RPS10P18-201ENST00000442662 495 ntBASIC4.55□□□□□ -1.68
CX3CL1P78423 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.55□□□□□ -1.68
CX3CL1P78423 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.55□□□□□ -1.68
CX3CL1P78423 AC011476.1-201ENST00000466725 307 ntBASIC4.55□□□□□ -1.68
CX3CL1P78423 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.55□□□□□ -1.68
CX3CL1P78423 RPL12P24-201ENST00000474907 486 ntBASIC4.55□□□□□ -1.68
CX3CL1P78423 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.55□□□□□ -1.68
CX3CL1P78423 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CL1P78423 DUTP1-201ENST00000493631 470 ntBASIC4.55□□□□□ -1.68
CX3CL1P78423 NENFP3-201ENST00000503735 313 ntBASIC4.55□□□□□ -1.68
CX3CL1P78423 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CL1P78423 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.55□□□□□ -1.68
CX3CL1P78423 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.55□□□□□ -1.68
CX3CL1P78423 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.55□□□□□ -1.68
CX3CL1P78423 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.55□□□□□ -1.68
CX3CL1P78423 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.55□□□□□ -1.68
CX3CL1P78423 SNORA70.20-201ENST00000516848 126 ntBASIC4.55□□□□□ -1.68
CX3CL1P78423 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.55□□□□□ -1.68
CX3CL1P78423 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.55□□□□□ -1.68
CX3CL1P78423 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.55□□□□□ -1.68
CX3CL1P78423 NANOGNBP2-201ENST00000544753 553 ntBASIC4.55□□□□□ -1.68
CX3CL1P78423 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.55□□□□□ -1.68
CX3CL1P78423 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.55□□□□□ -1.68
CX3CL1P78423 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.55□□□□□ -1.68
CX3CL1P78423 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.55□□□□□ -1.68
CX3CL1P78423 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.55□□□□□ -1.68
CX3CL1P78423 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.55□□□□□ -1.68
CX3CL1P78423 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CL1P78423 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CL1P78423 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.55□□□□□ -1.68
CX3CL1P78423 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.55□□□□□ -1.68
CX3CL1P78423 AC018552.1-201ENST00000562099 811 ntBASIC4.55□□□□□ -1.68
CX3CL1P78423 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.55□□□□□ -1.68
CX3CL1P78423 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.55□□□□□ -1.68
CX3CL1P78423 AC008507.2-201ENST00000588402 1176 ntBASIC4.55□□□□□ -1.68
CX3CL1P78423 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.55□□□□□ -1.68
CX3CL1P78423 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.55□□□□□ -1.68
CX3CL1P78423 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CL1P78423 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CL1P78423 AC090607.5-201ENST00000615692 224 ntBASIC4.55□□□□□ -1.68
CX3CL1P78423 AL035661.1-201ENST00000620459 1144 ntBASIC4.55□□□□□ -1.68
CX3CL1P78423 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.55□□□□□ -1.68
CX3CL1P78423 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CX3CL1P78423 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CL1P78423 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.55□□□□□ -1.68
CX3CL1P78423 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CL1P78423 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.55□□□□□ -1.68
CX3CL1P78423 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CL1P78423 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
CX3CL1P78423 SMG1P7-201ENST00000565246 2704 ntBASIC4.55□□□□□ -1.68
CX3CL1P78423 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CL1P78423 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CL1P78423 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.55□□□□□ -1.68
CX3CL1P78423 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.55□□□□□ -1.68
CX3CL1P78423 AL606537.1-201ENST00000607258 2011 ntBASIC4.55□□□□□ -1.68
CX3CL1P78423 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.55□□□□□ -1.68
CX3CL1P78423 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CL1P78423 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CL1P78423 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.55□□□□□ -1.68
CX3CL1P78423 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CL1P78423 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.54□□□□□ -1.68
CX3CL1P78423 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CX3CL1P78423 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CX3CL1P78423 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CX3CL1P78423 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CX3CL1P78423 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CX3CL1P78423 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.54□□□□□ -1.68
CX3CL1P78423 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CX3CL1P78423 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.54□□□□□ -1.68
CX3CL1P78423 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.54□□□□□ -1.68
CX3CL1P78423 AL645568.2-201ENST00000432815 1337 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
CX3CL1P78423 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CX3CL1P78423 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CX3CL1P78423 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CX3CL1P78423 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
CX3CL1P78423 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CX3CL1P78423 AL159987.1-201ENST00000347911 293 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 RNU6-207P-201ENST00000384137 107 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 MIR130A-201ENST00000385274 89 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 AP002784.2-201ENST00000397300 549 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms