Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LHX1P48742 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LHX1P48742 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
LHX1P48742 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
LHX1P48742 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LHX1P48742 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
LHX1P48742 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.47□□□□□ -1.53
LHX1P48742 AL022311.1-201ENST00000623726 19416 ntBASIC5.47□□□□□ -1.53
LHX1P48742 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LHX1P48742 MT-RNR1-201ENST00000389680 954 ntBASIC5.47□□□□□ -1.53
LHX1P48742 AL078599.1-201ENST00000402075 293 ntBASIC5.47□□□□□ -1.53
LHX1P48742 AL589647.1-201ENST00000402485 466 ntBASIC5.47□□□□□ -1.53
LHX1P48742 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.47□□□□□ -1.53
LHX1P48742 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.47□□□□□ -1.53
LHX1P48742 NDUFA5P1-201ENST00000433858 341 ntBASIC5.47□□□□□ -1.53
LHX1P48742 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.47□□□□□ -1.53
LHX1P48742 AC108161.1-201ENST00000461060 402 ntBASIC5.47□□□□□ -1.53
LHX1P48742 RN7SL443P-201ENST00000464331 290 ntBASIC5.47□□□□□ -1.53
LHX1P48742 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.47□□□□□ -1.53
LHX1P48742 AC020779.1-201ENST00000478757 796 ntBASIC5.47□□□□□ -1.53
LHX1P48742 RN7SL244P-201ENST00000493405 297 ntBASIC5.47□□□□□ -1.53
LHX1P48742 AC098976.1-201ENST00000513014 541 ntBASIC5.47□□□□□ -1.53
LHX1P48742 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LHX1P48742 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.47□□□□□ -1.53
LHX1P48742 AC027281.1-201ENST00000574178 758 ntBASIC5.47□□□□□ -1.53
LHX1P48742 MIR4646-201ENST00000580775 63 ntBASIC5.47□□□□□ -1.53
LHX1P48742 EIF3FP1-201ENST00000613970 806 ntBASIC5.47□□□□□ -1.53
LHX1P48742 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LHX1P48742 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.47□□□□□ -1.53
LHX1P48742 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.47□□□□□ -1.53
LHX1P48742 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
LHX1P48742 AC092111.2-201ENST00000611627 1414 ntBASIC5.47□□□□□ -1.53
LHX1P48742 AC116158.1-201ENST00000560231 2129 ntBASIC5.47□□□□□ -1.53
LHX1P48742 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
LHX1P48742 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.46□□□□□ -1.53
LHX1P48742 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.46□□□□□ -1.53
LHX1P48742 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.53
LHX1P48742 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LHX1P48742 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
LHX1P48742 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.46□□□□□ -1.54
LHX1P48742 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
LHX1P48742 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LHX1P48742 CASC19-221ENST00000641309 1382 ntBASIC5.46□□□□□ -1.54
LHX1P48742 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
LHX1P48742 AL353625.1-202ENST00000366273 571 ntBASIC5.46□□□□□ -1.54
LHX1P48742 AL645733.1-201ENST00000402250 217 ntBASIC5.46□□□□□ -1.54
LHX1P48742 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
LHX1P48742 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.46□□□□□ -1.54
LHX1P48742 REREP1Y-201ENST00000422655 198 ntBASIC5.46□□□□□ -1.54
LHX1P48742 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.46□□□□□ -1.54
LHX1P48742 MTCO1P57-201ENST00000432182 261 ntBASIC5.46□□□□□ -1.54
LHX1P48742 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LHX1P48742 REREP2Y-201ENST00000439103 200 ntBASIC5.46□□□□□ -1.54
LHX1P48742 BTBD7P2-201ENST00000441962 620 ntBASIC5.46□□□□□ -1.54
LHX1P48742 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.46□□□□□ -1.54
LHX1P48742 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.46□□□□□ -1.54
LHX1P48742 OR9N1P-201ENST00000491296 333 ntBASIC5.46□□□□□ -1.54
LHX1P48742 NDUFA5P12-201ENST00000503796 343 ntBASIC5.46□□□□□ -1.54
LHX1P48742 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.46□□□□□ -1.54
LHX1P48742 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.46□□□□□ -1.54
LHX1P48742 AC097486.1-201ENST00000515331 210 ntBASIC5.46□□□□□ -1.54
LHX1P48742 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.46□□□□□ -1.54
LHX1P48742 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.46□□□□□ -1.54
LHX1P48742 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.46□□□□□ -1.54
LHX1P48742 SNRPGP1-201ENST00000553864 222 ntBASIC5.46□□□□□ -1.54
LHX1P48742 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.46□□□□□ -1.54
LHX1P48742 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
LHX1P48742 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
LHX1P48742 KATNBL1P1-201ENST00000605192 748 ntBASIC5.46□□□□□ -1.54
LHX1P48742 AC008833.1-201ENST00000611633 691 ntBASIC5.46□□□□□ -1.54
LHX1P48742 AC020763.5-201ENST00000623298 430 ntBASIC5.46□□□□□ -1.54
LHX1P48742 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LHX1P48742 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LHX1P48742 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LHX1P48742 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.46□□□□□ -1.54
LHX1P48742 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
LHX1P48742 AC112255.1-201ENST00000624070 2493 ntBASIC5.46□□□□□ -1.54
LHX1P48742 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
LHX1P48742 DDX18P6-201ENST00000450119 1997 ntBASIC5.46□□□□□ -1.54
LHX1P48742 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
LHX1P48742 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LHX1P48742 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LHX1P48742 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
LHX1P48742 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
LHX1P48742 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.45□□□□□ -1.54
LHX1P48742 AC087565.3-202ENST00000642085 1603 ntBASIC5.45□□□□□ -1.54
LHX1P48742 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
LHX1P48742 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LHX1P48742 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LHX1P48742 AL589826.1-201ENST00000340697 249 ntBASIC5.45□□□□□ -1.54
LHX1P48742 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.45□□□□□ -1.54
LHX1P48742 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.45□□□□□ -1.54
LHX1P48742 MIR365B-201ENST00000362317 111 ntBASIC5.45□□□□□ -1.54
LHX1P48742 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
LHX1P48742 PEX12P1-201ENST00000400284 1048 ntBASIC5.45□□□□□ -1.54
LHX1P48742 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.45□□□□□ -1.54
LHX1P48742 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.45□□□□□ -1.54
LHX1P48742 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.45□□□□□ -1.54
LHX1P48742 RPS27P18-201ENST00000431701 247 ntBASIC5.45□□□□□ -1.54
LHX1P48742 VN1R54P-201ENST00000435210 1049 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms