Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 AC002553.2-201ENST00000453217 340 ntBASIC5.72□□□□□ -1.49
USP8P40818 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.72□□□□□ -1.49
USP8P40818 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.72□□□□□ -1.49
USP8P40818 MTCYBP14-201ENST00000457471 715 ntBASIC5.72□□□□□ -1.49
USP8P40818 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.72□□□□□ -1.49
USP8P40818 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.72□□□□□ -1.49
USP8P40818 RPSAP39-201ENST00000467439 883 ntBASIC5.72□□□□□ -1.49
USP8P40818 AP000797.2-201ENST00000475768 606 ntBASIC5.72□□□□□ -1.49
USP8P40818 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.72□□□□□ -1.49
USP8P40818 RN7SL273P-201ENST00000481561 299 ntBASIC5.72□□□□□ -1.49
USP8P40818 RN7SL423P-201ENST00000486202 304 ntBASIC5.72□□□□□ -1.49
USP8P40818 RN7SL547P-201ENST00000490793 290 ntBASIC5.72□□□□□ -1.49
USP8P40818 AC022133.1-201ENST00000490961 571 ntBASIC5.72□□□□□ -1.49
USP8P40818 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.72□□□□□ -1.49
USP8P40818 BTG4P1-201ENST00000510421 183 ntBASIC5.72□□□□□ -1.49
USP8P40818 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.72□□□□□ -1.49
USP8P40818 AC026688.1-201ENST00000520639 1168 ntBASIC5.72□□□□□ -1.49
USP8P40818 HMGB1P40-201ENST00000525121 540 ntBASIC5.72□□□□□ -1.49
USP8P40818 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.72□□□□□ -1.49
USP8P40818 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.72□□□□□ -1.49
USP8P40818 AC040958.1-201ENST00000561102 201 ntBASIC5.72□□□□□ -1.49
USP8P40818 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.72□□□□□ -1.49
USP8P40818 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
USP8P40818 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.72□□□□□ -1.49
USP8P40818 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
USP8P40818 MIR4310-201ENST00000582950 57 ntBASIC5.72□□□□□ -1.49
USP8P40818 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.72□□□□□ -1.49
USP8P40818 AC022106.2-201ENST00000620114 757 ntBASIC5.72□□□□□ -1.49
USP8P40818 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
USP8P40818 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
USP8P40818 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
USP8P40818 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.72□□□□□ -1.49
USP8P40818 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
USP8P40818 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.71□□□□□ -1.49
USP8P40818 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.71□□□□□ -1.49
USP8P40818 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
USP8P40818 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
USP8P40818 BTBD10P1-201ENST00000549824 1352 ntBASIC5.71□□□□□ -1.5
USP8P40818 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
USP8P40818 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
USP8P40818 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
USP8P40818 KARSP1-201ENST00000451871 1752 ntBASIC5.71□□□□□ -1.5
USP8P40818 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.71□□□□□ -1.5
USP8P40818 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
USP8P40818 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
USP8P40818 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
USP8P40818 OR9G4-201ENST00000302957 984 ntBASIC5.71□□□□□ -1.5
USP8P40818 RNA5SP335-201ENST00000363817 110 ntBASIC5.71□□□□□ -1.5
USP8P40818 AC007618.1-201ENST00000366455 732 ntBASIC5.71□□□□□ -1.5
USP8P40818 VDAC2P1-201ENST00000399358 958 ntBASIC5.71□□□□□ -1.5
USP8P40818 RPL10P10-201ENST00000403509 664 ntBASIC5.71□□□□□ -1.5
USP8P40818 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.71□□□□□ -1.5
USP8P40818 Z68694.1-201ENST00000413929 841 ntBASIC5.71□□□□□ -1.5
USP8P40818 COX5BP7-201ENST00000414780 274 ntBASIC5.71□□□□□ -1.5
USP8P40818 PCNPP4-201ENST00000414817 517 ntBASIC5.71□□□□□ -1.5
USP8P40818 NANOGP4-201ENST00000427230 913 ntBASIC5.71□□□□□ -1.5
USP8P40818 AC016772.1-201ENST00000444170 1261 ntBASIC5.71□□□□□ -1.5
USP8P40818 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.71□□□□□ -1.5
USP8P40818 AL591363.1-201ENST00000450091 483 ntBASIC5.71□□□□□ -1.5
USP8P40818 RPS27AP2-201ENST00000457576 465 ntBASIC5.71□□□□□ -1.5
USP8P40818 AL591473.1-201ENST00000464297 313 ntBASIC5.71□□□□□ -1.5
USP8P40818 EIF1P7-201ENST00000487533 337 ntBASIC5.71□□□□□ -1.5
USP8P40818 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.71□□□□□ -1.5
USP8P40818 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.71□□□□□ -1.5
USP8P40818 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.71□□□□□ -1.5
USP8P40818 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.71□□□□□ -1.5
USP8P40818 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.71□□□□□ -1.5
USP8P40818 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.71□□□□□ -1.5
USP8P40818 SUGT1P3-202ENST00000604259 383 ntBASIC5.71□□□□□ -1.5
USP8P40818 AL589674.2-201ENST00000604304 337 ntBASIC5.71□□□□□ -1.5
USP8P40818 AC005252.1-201ENST00000604518 1063 ntBASIC5.71□□□□□ -1.5
USP8P40818 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.71□□□□□ -1.5
USP8P40818 AC005840.5-201ENST00000619166 599 ntBASIC5.71□□□□□ -1.5
USP8P40818 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.71□□□□□ -1.5
USP8P40818 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.71□□□□□ -1.5
USP8P40818 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
USP8P40818 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
USP8P40818 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
USP8P40818 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
USP8P40818 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
USP8P40818 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
USP8P40818 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.71□□□□□ -1.5
USP8P40818 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
USP8P40818 AC000123.3-201ENST00000624029 4975 ntBASIC5.7□□□□□ -1.5
USP8P40818 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.7□□□□□ -1.5
USP8P40818 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USP8P40818 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.7□□□□□ -1.5
USP8P40818 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
USP8P40818 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USP8P40818 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.7□□□□□ -1.5
USP8P40818 SCARNA15-201ENST00000607520 4325 ntBASIC5.7□□□□□ -1.5
USP8P40818 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
USP8P40818 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USP8P40818 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USP8P40818 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
USP8P40818 AL133325.1-201ENST00000421090 382 ntBASIC5.7□□□□□ -1.5
USP8P40818 AL356806.1-201ENST00000422524 916 ntBASIC5.7□□□□□ -1.5
USP8P40818 DSTNP5-201ENST00000427921 523 ntBASIC5.7□□□□□ -1.5
USP8P40818 RPL12P11-201ENST00000439970 501 ntBASIC5.7□□□□□ -1.5
USP8P40818 GAPDHP25-201ENST00000447061 1001 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms