Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 RNA5SP394-201ENST00000364216 119 ntBASIC4.41□□□□□ -1.7
HLA-DMAP28067 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DMAP28067 AL390316.1-201ENST00000406279 553 ntBASIC4.41□□□□□ -1.7
HLA-DMAP28067 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DMAP28067 AC245060.4-201ENST00000413293 1121 ntBASIC4.41□□□□□ -1.7
HLA-DMAP28067 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DMAP28067 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DMAP28067 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DMAP28067 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-DMAP28067 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.41□□□□□ -1.7
HLA-DMAP28067 KF459542.1-201ENST00000450908 553 ntBASIC4.41□□□□□ -1.7
HLA-DMAP28067 AC022431.1-201ENST00000450941 438 ntBASIC4.41□□□□□ -1.7
HLA-DMAP28067 AC079168.1-201ENST00000458741 345 ntBASIC4.41□□□□□ -1.7
HLA-DMAP28067 TRBV8-1-201ENST00000481590 279 ntBASIC4.41□□□□□ -1.7
HLA-DMAP28067 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DMAP28067 LSM3P4-201ENST00000502948 309 ntBASIC4.41□□□□□ -1.7
HLA-DMAP28067 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DMAP28067 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DMAP28067 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DMAP28067 AK6-204ENST00000512561 587 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DMAP28067 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DMAP28067 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DMAP28067 RAB30-209ENST00000532548 644 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DMAP28067 AC068305.2-201ENST00000550567 1205 ntBASIC4.41□□□□□ -1.7
HLA-DMAP28067 ATP5J2P6-201ENST00000565203 266 ntBASIC4.41□□□□□ -1.7
HLA-DMAP28067 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.41□□□□□ -1.7
HLA-DMAP28067 AC005252.1-201ENST00000604518 1063 ntBASIC4.41□□□□□ -1.7
HLA-DMAP28067 AL158196.1-201ENST00000616786 434 ntBASIC4.41□□□□□ -1.7
HLA-DMAP28067 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DMAP28067 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DMAP28067 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DMAP28067 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.41□□□□□ -1.7
HLA-DMAP28067 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
HLA-DMAP28067 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DMAP28067 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DMAP28067 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DMAP28067 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DMAP28067 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DMAP28067 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
HLA-DMAP28067 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
HLA-DMAP28067 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HLA-DMAP28067 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HLA-DMAP28067 AC017104.4-201ENST00000636283 1592 ntBASIC4.4□□□□□ -1.7
HLA-DMAP28067 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HLA-DMAP28067 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.4□□□□□ -1.7
HLA-DMAP28067 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HLA-DMAP28067 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HLA-DMAP28067 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DMAP28067 RNU1-108P-201ENST00000362556 161 ntBASIC4.4□□□□□ -1.71
HLA-DMAP28067 RNU1-20P-201ENST00000363314 162 ntBASIC4.4□□□□□ -1.71
HLA-DMAP28067 RNU4-2-201ENST00000365668 141 ntBASIC4.4□□□□□ -1.71
HLA-DMAP28067 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DMAP28067 AC073136.2-201ENST00000417282 849 ntBASIC4.4□□□□□ -1.71
HLA-DMAP28067 SRSF1P1-201ENST00000424058 520 ntBASIC4.4□□□□□ -1.71
HLA-DMAP28067 EIF4HP2-201ENST00000424380 563 ntBASIC4.4□□□□□ -1.71
HLA-DMAP28067 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.4□□□□□ -1.71
HLA-DMAP28067 HMGB3P9-201ENST00000441799 583 ntBASIC4.4□□□□□ -1.71
HLA-DMAP28067 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.4□□□□□ -1.71
HLA-DMAP28067 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DMAP28067 RPL10P17-201ENST00000453852 316 ntBASIC4.4□□□□□ -1.71
HLA-DMAP28067 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.4□□□□□ -1.71
HLA-DMAP28067 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DMAP28067 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.4□□□□□ -1.71
HLA-DMAP28067 UBA52P3-201ENST00000491303 382 ntBASIC4.4□□□□□ -1.71
HLA-DMAP28067 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
HLA-DMAP28067 AC025458.1-201ENST00000506046 166 ntBASIC4.4□□□□□ -1.71
HLA-DMAP28067 HMGB1P44-201ENST00000508597 572 ntBASIC4.4□□□□□ -1.71
HLA-DMAP28067 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.4□□□□□ -1.71
HLA-DMAP28067 snoU109.6-201ENST00000516831 118 ntBASIC4.4□□□□□ -1.71
HLA-DMAP28067 SNORA43.3-201ENST00000517240 103 ntBASIC4.4□□□□□ -1.71
HLA-DMAP28067 AF186190.1-201ENST00000517470 480 ntBASIC4.4□□□□□ -1.71
HLA-DMAP28067 MYL12AP1-201ENST00000518490 515 ntBASIC4.4□□□□□ -1.71
HLA-DMAP28067 AC027369.2-201ENST00000528030 440 ntBASIC4.4□□□□□ -1.71
HLA-DMAP28067 AP003033.2-201ENST00000528901 805 ntBASIC4.4□□□□□ -1.71
HLA-DMAP28067 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
HLA-DMAP28067 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.4□□□□□ -1.71
HLA-DMAP28067 IGBP1P1-201ENST00000554337 1009 ntBASIC4.4□□□□□ -1.71
HLA-DMAP28067 AL845552.1-201ENST00000556820 323 ntBASIC4.4□□□□□ -1.71
HLA-DMAP28067 RBM22P12-201ENST00000567098 1255 ntBASIC4.4□□□□□ -1.71
HLA-DMAP28067 AC092121.1-201ENST00000569452 202 ntBASIC4.4□□□□□ -1.71
HLA-DMAP28067 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
HLA-DMAP28067 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.4□□□□□ -1.71
HLA-DMAP28067 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DMAP28067 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
HLA-DMAP28067 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DMAP28067 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DMAP28067 AC004232.3-201ENST00000622977 525 ntBASIC4.4□□□□□ -1.71
HLA-DMAP28067 AC005086.4-201ENST00000623065 213 ntBASIC4.4□□□□□ -1.71
HLA-DMAP28067 MTCO1P1-201ENST00000624263 1081 ntBASIC4.4□□□□□ -1.71
HLA-DMAP28067 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DMAP28067 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DMAP28067 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
HLA-DMAP28067 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
HLA-DMAP28067 AL672167.1-205ENST00000641112 3080 ntBASIC4.4□□□□□ -1.71
HLA-DMAP28067 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.4□□□□□ -1.71
HLA-DMAP28067 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DMAP28067 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
HLA-DMAP28067 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DMAP28067 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DMAP28067 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms